type: position_score
table:
  filename: ENCFF283LNH.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000AKG
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000AKG [biosample_summary="Homo sapiens GM12878" and target="H3K4me2"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000AKG [biosample_summary="Homo sapiens GM12878" and target="H3K4me2"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN817KMK|/analyses/ENCAN817KMK/} has in progress\
    \ subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN817KMK|/analyses/ENCAN817KMK/}\
    \ has in progress subobject document {e0dcf38a-88f2-4505-a1c2-c980d065827c|/documents/e0dcf38a-88f2-4505-a1c2-c980d065827c/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF008LEY|/files/ENCFF008LEY/}\
    \ processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline has 7036715 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K4me2-human and investigated as a narrow histone mark is 10 million usable\
    \ fragments. The recommended value is > 20 million, but > 10 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\
    _not\\_compliant**: Processed alignments file {ENCFF081ODV|/files/ENCFF081ODV/}\
    \ processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline has 5911809 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K4me2-human and investigated as a narrow histone mark is 10 million usable\
    \ fragments. The recommended value is > 20 million, but > 10 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000AKG
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens GM12878
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002784/
    perturbed: false
    doi: 10.17989/ENCSR000AKG
    date_created: '2013-11-07T22:16:20.422864+00:00'
    date_released: '2011-02-10'
    submitter_comment: ''
    target: H3K4me2