Resource

Id DNase-seq/ENCSR987CQNcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR987CQN [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (88 years)"]
Description
Labels
  • accession: ENCSR987CQN
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002740/
  • biosample_summary: Homo sapiens posterior cingulate gyrus tissue female adult (88 years)
  • date_created: 2020-05-28T00:56:22.124665+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR987CQN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (88 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR987CQN float

DNase-seq_ENCSR987CQN
DNase-seq ENCSR987CQN [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (88 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR987CQN [0.0688, 43.5]
n
14,536,069
mean
3.28
sd
4.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 145360690.45% 81336
chr1 1401470 0.56% 7841
chr2 1061354 0.44% 6004
chr3 835159 0.42% 4684
chr4 601324 0.32% 3326
chr5 704288 0.39% 4040
chr6 726347 0.43% 4060
chr7 720503 0.45% 4103
chr8 672959 0.46% 3769
chr9 651232 0.47% 3631
chr10 704017 0.53% 3940
chr11 847332 0.63% 4723
chr12 727094 0.55% 4019
chr13 309082 0.27% 1758
chr14 479124 0.45% 2683
chr15 455025 0.45% 2583
chr16 559470 0.62% 3116
chr17 758294 0.91% 4210
chr18 254219 0.32% 1459
chr19 721142 1.23% 3811
chr20 431925 0.67% 2465
chr21 210638 0.45% 1180
chr22 363024 0.71% 2033
chrX 340700 0.22% 1895
chrY 347 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 81336 2 860 178.72 179
global segment-length histogram

Files

Filename Size md5
ENCFF127HQV.bed.gz 900.23 KB 877e72d0f44513a6e6862f999e65df91
ENCFF127HQV.tabix.bed.gz 814.53 KB 9c804edede3db7538543e76c6fb3c927
ENCFF127HQV.tabix.bed.gz.tbi 341.0 KB e6f76b32fc61c94971e010f4f44b6d97
genomic_resource.yaml 1.27 KB 3120751c40dff17064c835f7778550e8
statistics/