Resource
| Id | DNase-seq/ENCSR978QUT |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR978QUT [biosample_summary="Homo sapiens testis tissue male adult (54 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: male adult (54 years) output_type: peaks audit_internal_action: Archived analysis {ENCAN645WYD|/analyses/ENCAN645WYD/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR978QUT | float |
DNase-seq_ENCSR978QUT |
DNase-seq ENCSR978QUT [biosample_summary="Homo sapiens testis tissue male adult (54 years)"]
|
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[5, 5.38e+03] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 25577186 | 0.79% | 169591 |
| chr1 | 2252391 | 0.90% | 14937 |
| chr2 | 2771251 | 1.14% | 18375 |
| chr3 | 1452846 | 0.73% | 9635 |
| chr4 | 807721 | 0.42% | 5361 |
| chr5 | 1315333 | 0.72% | 8716 |
| chr6 | 1217918 | 0.71% | 8088 |
| chr7 | 1376268 | 0.86% | 9127 |
| chr8 | 1182146 | 0.81% | 7820 |
| chr9 | 1130703 | 0.82% | 7503 |
| chr10 | 1892476 | 1.41% | 12552 |
| chr11 | 1319601 | 0.98% | 8748 |
| chr12 | 911175 | 0.68% | 6029 |
| chr13 | 660044 | 0.58% | 4379 |
| chr14 | 791179 | 0.74% | 5239 |
| chr15 | 1034632 | 1.01% | 6873 |
| chr16 | 896570 | 0.99% | 5966 |
| chr17 | 798113 | 0.96% | 5272 |
| chr18 | 729676 | 0.91% | 4831 |
| chr19 | 733738 | 1.25% | 4865 |
| chr20 | 947344 | 1.47% | 6285 |
| chr21 | 444859 | 0.95% | 2950 |
| chr22 | 640961 | 1.26% | 4254 |
| chrX | 225149 | 0.14% | 1487 |
| chrY | 45092 | 0.08% | 299 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 169591 | 2 | 546 | 150.82 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF833PXP.bed.gz | 1.49 MB | c905c4c05d4af323f34bddc6b345fb9b |
| ENCFF833PXP.tabix.bed.gz | 1.28 MB | 952470010f3ce71e841a21cef3afd677 |
| ENCFF833PXP.tabix.bed.gz.tbi | 235.74 KB | 215f416eb1e00ba93174af802a585253 |
| genomic_resource.yaml | 1.37 KB | 4636bd81caa8c5aa8834f45099e3aa43 |
| statistics/ |
