Resource

Id DNase-seq/ENCSR970ZLGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR970ZLG [biosample_summary="Homo sapiens small intestine tissue male embryo (87 days)"]
Description
Labels
  • accession: ENCSR970ZLG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002108/
  • biosample_summary: Homo sapiens small intestine tissue male embryo (87 days)
  • date_created: 2015-09-16T21:42:48.653842+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR970ZLG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (87 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR970ZLG float

DNase-seq_ENCSR970ZLG
DNase-seq ENCSR970ZLG [biosample_summary="Homo sapiens small intestine tissue male embryo (87 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR970ZLG [0.175, 18.6]
n
10,250,357
mean
3.19
sd
2.89

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 102503570.32% 55358
chr1 992143 0.40% 5300
chr2 784993 0.32% 4253
chr3 665303 0.34% 3603
chr4 494676 0.26% 2723
chr5 519718 0.29% 2846
chr6 617574 0.36% 3316
chr7 519915 0.33% 2826
chr8 443736 0.31% 2417
chr9 428117 0.31% 2317
chr10 458310 0.34% 2533
chr11 520229 0.39% 2849
chr12 528292 0.40% 2837
chr13 251285 0.22% 1339
chr14 337740 0.32% 1774
chr15 332861 0.33% 1825
chr16 355101 0.39% 1918
chr17 461855 0.55% 2475
chr18 233275 0.29% 1294
chr19 499577 0.85% 2510
chr20 259406 0.40% 1425
chr21 105810 0.23% 579
chr22 192137 0.38% 1045
chrX 238953 0.15% 1300
chrY 9351 0.02% 54
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55358 4 940 185.16 180
global segment-length histogram

Files

Filename Size md5
ENCFF583UBN.bed.gz 585.56 KB 92ddc2789ce134c03d4cff7a3e690bb0
ENCFF583UBN.tabix.bed.gz 523.58 KB 602936a671d4fe54b78c5394863d3722
ENCFF583UBN.tabix.bed.gz.tbi 296.43 KB fa29a802416c7876d0f2e59597e23026
genomic_resource.yaml 1.84 KB 04af18b284fbd5d26bb7edef216f0839
statistics/