Resource

Id DNase-seq/ENCSR962VJOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR962VJO [biosample_summary="Homo sapiens adrenal gland tissue female child (16 years)"]
Description
Labels
  • accession: ENCSR962VJO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female child (16 years)
  • date_created: 2019-11-01T19:05:04.202018+00:00
  • date_released: 2020-09-19
  • doi: 10.17989/ENCSR962VJO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR962VJO float

DNase-seq_ENCSR962VJO

DNase-seq ENCSR962VJO [biosample_summary="Homo sapiens adrenal gland tissue female child (16 years)"]
HISTOGRAM FOR DNase-seq_ENCSR962VJO [0.0389, 22.9]
n
18,795,601
mean
1.83
sd
2.31

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 187956010.58% 93606
chr1 1759229 0.71% 8706
chr2 1435171 0.59% 7239
chr3 1054567 0.53% 5352
chr4 651601 0.34% 3310
chr5 847481 0.47% 4317
chr6 904766 0.53% 4580
chr7 913536 0.57% 4564
chr8 808943 0.56% 4015
chr9 924764 0.67% 4582
chr10 903489 0.68% 4513
chr11 1107059 0.82% 5432
chr12 868155 0.65% 4326
chr13 348815 0.31% 1780
chr14 601102 0.56% 3013
chr15 657131 0.64% 3272
chr16 721792 0.80% 3589
chr17 1071126 1.29% 5178
chr18 336518 0.42% 1729
chr19 1071612 1.83% 5073
chr20 563552 0.87% 2809
chr21 268515 0.57% 1311
chr22 483728 0.95% 2413
chrX 492387 0.32% 2498
chrY 562 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93606 1 1040 200.79 186
global segment-length histogram

Files

Filename Size md5
ENCFF715QGZ.bed.gz 1001.87 KB 2a5812ae16f052c41a2881e2b2207b11
ENCFF715QGZ.tabix.bed.gz 936.99 KB 29ae36292c9e12a6b79fc752d7c448dc
ENCFF715QGZ.tabix.bed.gz.tbi 332.62 KB f110d0411100510d8a3f81d837ad09c9
genomic_resource.yaml 1.23 KB e7a746b4053ffab10770a3f991989bc6
statistics/