Resource

Id DNase-seq/ENCSR938OKLcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR938OKL [biosample_summary="Homo sapiens CD8-positive, alpha-beta memory T cell"]
Description
Labels
  • accession: ENCSR938OKL
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000909/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta memory T cell
  • date_created: 2022-02-07T22:20:22.055568+00:00
  • date_released: 2022-02-25
  • doi: 10.17989/ENCSR938OKL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR938OKL float

DNase-seq_ENCSR938OKL

DNase-seq ENCSR938OKL [biosample_summary="Homo sapiens CD8-positive, alpha-beta memory T cell"]
HISTOGRAM FOR DNase-seq_ENCSR938OKL [0.0752, 61]
n
14,828,052
mean
4.67
sd
6.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 148280520.46% 69802
chr1 1468278 0.59% 6869
chr2 1108120 0.46% 5191
chr3 811627 0.41% 3870
chr4 543238 0.29% 2597
chr5 673385 0.37% 3150
chr6 908611 0.53% 4160
chr7 712414 0.45% 3385
chr8 541906 0.37% 2598
chr9 575948 0.42% 2745
chr10 661070 0.49% 3103
chr11 766663 0.57% 3662
chr12 775955 0.58% 3646
chr13 341266 0.30% 1601
chr14 532486 0.50% 2490
chr15 460203 0.45% 2250
chr16 569507 0.63% 2649
chr17 870157 1.05% 4058
chr18 246106 0.31% 1167
chr19 846255 1.44% 3866
chr20 407693 0.63% 1945
chr21 184237 0.39% 875
chr22 344106 0.68% 1664
chrX 478821 0.31% 2261
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 69802 1 1000 212.43 200
global segment-length histogram

Files

Filename Size md5
ENCFF006OSW.bed.gz 773.85 KB c5783f502dd630114cff87d6e4fe511d
ENCFF006OSW.tabix.bed.gz 714.59 KB 9bf225932295b1bb6bec9c896955bfae
ENCFF006OSW.tabix.bed.gz.tbi 284.13 KB bc661f6c87922372209e75c4a30181c1
genomic_resource.yaml 1.17 KB 10e80d06996fbc56411d490c97a6be20
statistics/