Resource

Id DNase-seq/ENCSR937RVNcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR937RVN [biosample_summary="Homo sapiens muscle of leg tissue male embryo (115 days)"]
Description
Labels
  • accession: ENCSR937RVN
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001383/
  • biosample_summary: Homo sapiens muscle of leg tissue male embryo (115 days)
  • date_created: 2015-09-16T21:42:37.468120+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR937RVN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (115 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR937RVN float

DNase-seq_ENCSR937RVN

DNase-seq ENCSR937RVN [biosample_summary="Homo sapiens muscle of leg tissue male embryo (115 days)"]
HISTOGRAM FOR DNase-seq_ENCSR937RVN [4, 978]
n
9,703,925
mean
37.3
sd
30.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 97039250.30% 64379
chr1 827766 0.33% 5494
chr2 815022 0.34% 5412
chr3 683113 0.34% 4520
chr4 558432 0.29% 3704
chr5 596825 0.33% 3959
chr6 641213 0.38% 4248
chr7 487302 0.31% 3233
chr8 486270 0.34% 3234
chr9 395448 0.29% 2624
chr10 491567 0.37% 3263
chr11 476672 0.35% 3159
chr12 478770 0.36% 3170
chr13 299448 0.26% 1987
chr14 312850 0.29% 2073
chr15 299464 0.29% 1986
chr16 266330 0.29% 1771
chr17 325661 0.39% 2162
chr18 239047 0.30% 1588
chr19 269459 0.46% 1788
chr20 226247 0.35% 1502
chr21 118240 0.25% 783
chr22 134822 0.27% 899
chrX 263607 0.17% 1751
chrY 10350 0.02% 69
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64379 9 450 150.73 150
global segment-length histogram

Files

Filename Size md5
ENCFF401SKP.bed.gz 624.65 KB 55580b60dd61a57dafbacb56326ea20e
ENCFF401SKP.tabix.bed.gz 533.93 KB 79f48a7ea9abde469b6edf107411c586
ENCFF401SKP.tabix.bed.gz.tbi 348.07 KB 426d1a97cc63c2b3b992412721dbca9c
genomic_resource.yaml 1.4 KB f3e99c891086b1a9f8491bae607988c9
statistics/