Resource

Id DNase-seq/ENCSR930AUGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR930AUG [biosample_summary="Homo sapiens right lung tissue female embryo (108 days)"]
Description
Labels
  • accession: ENCSR930AUG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002167/
  • biosample_summary: Homo sapiens right lung tissue female embryo (108 days)
  • date_created: 2015-09-16T21:42:52.625258+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR930AUG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (108 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR930AUG float

DNase-seq_ENCSR930AUG
DNase-seq ENCSR930AUG [biosample_summary="Homo sapiens right lung tissue female embryo (108 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR930AUG [0.174, 44.7]
n
16,249,902
mean
3
sd
3.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 162499020.51% 92142
chr1 1437600 0.58% 8176
chr2 1353436 0.56% 7726
chr3 1104335 0.56% 6294
chr4 865818 0.46% 4967
chr5 957700 0.53% 5459
chr6 991695 0.58% 5629
chr7 848287 0.53% 4842
chr8 775816 0.53% 4388
chr9 680309 0.49% 3823
chr10 807004 0.60% 4618
chr11 824113 0.61% 4669
chr12 781505 0.59% 4434
chr13 478865 0.42% 2743
chr14 510113 0.48% 2882
chr15 509000 0.50% 2914
chr16 489229 0.54% 2717
chr17 615839 0.74% 3434
chr18 386531 0.48% 2211
chr19 519467 0.89% 2757
chr20 399651 0.62% 2256
chr21 190759 0.41% 1091
chr22 248099 0.49% 1388
chrX 474286 0.30% 2721
chrY 445 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92142 1 780 176.36 180
global segment-length histogram

Files

Filename Size md5
ENCFF673OFD.bed.gz 990.38 KB 957874760f9180280814ac9d8fe8758d
ENCFF673OFD.tabix.bed.gz 882.51 KB 56b615abb54d7a30560015aa2a5e76c4
ENCFF673OFD.tabix.bed.gz.tbi 466.18 KB 566e08510dfc62f4b0da778d345e39cb
genomic_resource.yaml 1.84 KB b13a6aaa8fa89ecc66a20c86f3fcd34c
statistics/