Resource

Id DNase-seq/ENCSR914DOHcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR914DOH [biosample_summary="Homo sapiens heart tissue female embryo (103 days)"]
Description
Labels
  • accession: ENCSR914DOH
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue female embryo (103 days)
  • date_created: 2015-09-16T21:42:26.234516+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR914DOH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (103 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR914DOH float

DNase-seq_ENCSR914DOH
DNase-seq ENCSR914DOH [biosample_summary="Homo sapiens heart tissue female embryo (103 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR914DOH [3, 790]
n
9,803,812
mean
43
sd
32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 98038120.30% 65047
chr1 929718 0.37% 6161
chr2 804725 0.33% 5336
chr3 691625 0.35% 4594
chr4 558847 0.29% 3699
chr5 563751 0.31% 3746
chr6 620344 0.36% 4102
chr7 519034 0.33% 3449
chr8 433376 0.30% 2876
chr9 403127 0.29% 2676
chr10 468797 0.35% 3118
chr11 495638 0.37% 3293
chr12 483999 0.36% 3210
chr13 281910 0.25% 1870
chr14 293252 0.27% 1943
chr15 335494 0.33% 2227
chr16 290282 0.32% 1930
chr17 372286 0.45% 2474
chr18 237028 0.29% 1571
chr19 314629 0.54% 2093
chr20 219492 0.34% 1454
chr21 101876 0.22% 678
chr22 149211 0.29% 991
chrX 234771 0.15% 1552
chrY 600 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65047 3 450 150.72 150
global segment-length histogram

Files

Filename Size md5
ENCFF053SED.bed.gz 629.84 KB dd8fabe68e0d9517e38626257bccb8c2
ENCFF053SED.tabix.bed.gz 540.24 KB 7690db605ffbcf2334557013b2290863
ENCFF053SED.tabix.bed.gz.tbi 307.34 KB c55a313794a876e829bcb09960aaf45a
genomic_resource.yaml 1.39 KB 22abb03fdbc47abed94d2194acd07204
statistics/