Resource

Id DNase-seq/ENCSR911LTIcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR911LTI [biosample_summary="Homo sapiens heart tissue embryo (96 days)"]
Description
Labels
  • accession: ENCSR911LTI
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue embryo (96 days)
  • date_created: 2015-09-16T21:42:26.594743+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR911LTI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (96 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR911LTI float

DNase-seq_ENCSR911LTI
DNase-seq ENCSR911LTI [biosample_summary="Homo sapiens heart tissue embryo (96 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR911LTI [5, 1.82e+04]
n
48,497,134
mean
257
sd
493

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 484971341.51% 322831
chr1 4387396 1.76% 29209
chr2 4110250 1.70% 27362
chr3 3376552 1.70% 22490
chr4 2751749 1.45% 18313
chr5 2942189 1.62% 19582
chr6 2991000 1.75% 19914
chr7 2573477 1.62% 17126
chr8 2320014 1.60% 15441
chr9 1999141 1.44% 13311
chr10 2419839 1.81% 16113
chr11 2366628 1.75% 15752
chr12 2309751 1.73% 15375
chr13 1510242 1.32% 10050
chr14 1432584 1.34% 9535
chr15 1564858 1.53% 10415
chr16 1351352 1.50% 8997
chr17 1686004 2.03% 11227
chr18 1239874 1.54% 8251
chr19 1138633 1.94% 7578
chr20 1138502 1.77% 7587
chr21 550650 1.18% 3665
chr22 766439 1.51% 5103
chrX 1498962 0.96% 9961
chrY 71048 0.12% 474
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 322831 15 450 150.22 150
global segment-length histogram

Files

Filename Size md5
ENCFF911WSI.bed.gz 3.06 MB 0239bfd4f3260b9eca4d184109d3959c
ENCFF911WSI.tabix.bed.gz 2.65 MB 418a166bab098c5a9b514499bf67c1d0
ENCFF911WSI.tabix.bed.gz.tbi 801.64 KB 4860a6d0985a68494b8d30da896fbfc2
genomic_resource.yaml 1.35 KB 47b37a12f1f1f0b8710a910cf552171c
statistics/