Resource

Id DNase-seq/ENCSR910OQFcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR910OQF [biosample_summary="Homo sapiens spinal cord tissue female embryo (59 days) and male embryo (72 days)"]
Description
Labels
  • accession: ENCSR910OQF
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002240/
  • biosample_summary: Homo sapiens spinal cord tissue female embryo (59 days) and male embryo (72 days)
  • date_created: 2014-06-20T23:45:09.743198+00:00
  • date_released: 2015-08-31
  • doi: 10.17989/ENCSR910OQF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary: male embryo (72 days) female embryo (59 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR910OQF float

DNase-seq_ENCSR910OQF
DNase-seq ENCSR910OQF [biosample_summary="Homo sapiens spinal cord tissue female embryo (59 days) and male embryo (72 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR910OQF [3, 150]
n
71,670,890
mean
67.9
sd
29.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 716708902.23% 497701
chr1 6047400 2.43% 42039
chr2 6182170 2.55% 43005
chr3 4801630 2.42% 33245
chr4 4068650 2.14% 28264
chr5 4396420 2.42% 30466
chr6 4195980 2.46% 29109
chr7 3824600 2.40% 26878
chr8 3676710 2.53% 25448
chr9 2976850 2.15% 20652
chr10 3681380 2.75% 25445
chr11 3515460 2.60% 24449
chr12 3379010 2.54% 23467
chr13 2313480 2.02% 15996
chr14 2268660 2.12% 15731
chr15 2201920 2.16% 15214
chr16 2376960 2.63% 16529
chr17 2450750 2.94% 17106
chr18 2000020 2.49% 13721
chr19 1445170 2.47% 10148
chr20 1822860 2.83% 12597
chr21 829800 1.78% 5777
chr22 1126130 2.22% 7842
chrX 2019380 1.29% 14039
chrY 69500 0.12% 534
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 497701 10 410 144 150
global segment-length histogram

Files

Filename Size md5
ENCFF327BRB.bed.gz 4.19 MB c165e74dc3c54b4bcb1cf2d750154fc4
ENCFF327BRB.tabix.bed.gz 3.81 MB 20b09dda7937e618124f86c3c60a20c7
ENCFF327BRB.tabix.bed.gz.tbi 965.1 KB 17c3bd010579305222fa76208573f530
genomic_resource.yaml 1.35 KB c1b3021bcd37d0c039f5cf2b13c14744
statistics/