Resource
| Id | DNase-seq/ENCSR908MUU |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR908MUU [biosample_summary="Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (90 or above years) with mild cognitive impairment output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR908MUU | float |
DNase-seq_ENCSR908MUU |
DNase-seq ENCSR908MUU [biosample_summary="Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)"]
|
![]() |
[0.0742, 25.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 11731509 | 0.36% | 62381 |
| chr1 | 1105535 | 0.44% | 5844 |
| chr2 | 905558 | 0.37% | 4863 |
| chr3 | 625878 | 0.32% | 3324 |
| chr4 | 449006 | 0.24% | 2373 |
| chr5 | 559640 | 0.31% | 3022 |
| chr6 | 596934 | 0.35% | 3153 |
| chr7 | 574135 | 0.36% | 3080 |
| chr8 | 479956 | 0.33% | 2597 |
| chr9 | 547093 | 0.40% | 2871 |
| chr10 | 624571 | 0.47% | 3295 |
| chr11 | 692514 | 0.51% | 3736 |
| chr12 | 531533 | 0.40% | 2783 |
| chr13 | 220366 | 0.19% | 1183 |
| chr14 | 377611 | 0.35% | 2005 |
| chr15 | 398727 | 0.39% | 2130 |
| chr16 | 445609 | 0.49% | 2359 |
| chr17 | 635304 | 0.76% | 3366 |
| chr18 | 202909 | 0.25% | 1127 |
| chr19 | 629467 | 1.07% | 3202 |
| chr20 | 362998 | 0.56% | 1974 |
| chr21 | 134113 | 0.29% | 743 |
| chr22 | 349529 | 0.69% | 1865 |
| chrX | 281913 | 0.18% | 1480 |
| chrY | 610 | <0.01% | 6 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 62381 | 2 | 878 | 188.06 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF554SUA.bed.gz | 692.05 KB | b66298b615d9fd4a86762be4644c9231 |
| ENCFF554SUA.tabix.bed.gz | 628.5 KB | 984bbd64b2452e091f350b5df198f784 |
| ENCFF554SUA.tabix.bed.gz.tbi | 265.0 KB | 543fbca22831c6659da8406e22c39321 |
| genomic_resource.yaml | 1.47 KB | 144bc64ccb83d7283a9067edb1b58287 |
| statistics/ |
