Resource
| Id | DNase-seq/ENCSR866ODX |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR866ODX [biosample_summary="Homo sapiens testis tissue male adult (37 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: male adult (37 years) output_type: peaks audit_internal_action: Archived analysis {ENCAN627PMF|/analyses/ENCAN627PMF/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR866ODX | float |
DNase-seq_ENCSR866ODX |
DNase-seq ENCSR866ODX [biosample_summary="Homo sapiens testis tissue male adult (37 years)"]
|
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[7, 1.73e+04] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 14091580 | 0.44% | 93811 |
| chr1 | 1320968 | 0.53% | 8797 |
| chr2 | 1067203 | 0.44% | 7105 |
| chr3 | 888489 | 0.45% | 5919 |
| chr4 | 649309 | 0.34% | 4321 |
| chr5 | 724566 | 0.40% | 4823 |
| chr6 | 811737 | 0.48% | 5405 |
| chr7 | 713874 | 0.45% | 4750 |
| chr8 | 631569 | 0.44% | 4201 |
| chr9 | 620725 | 0.45% | 4134 |
| chr10 | 652453 | 0.49% | 4341 |
| chr11 | 718831 | 0.53% | 4790 |
| chr12 | 680276 | 0.51% | 4530 |
| chr13 | 344175 | 0.30% | 2292 |
| chr14 | 453575 | 0.42% | 3018 |
| chr15 | 467728 | 0.46% | 3111 |
| chr16 | 501424 | 0.56% | 3339 |
| chr17 | 638204 | 0.77% | 4244 |
| chr18 | 297811 | 0.37% | 1981 |
| chr19 | 608391 | 1.04% | 4054 |
| chr20 | 408300 | 0.63% | 2715 |
| chr21 | 162007 | 0.35% | 1080 |
| chr22 | 287570 | 0.57% | 1915 |
| chrX | 419595 | 0.27% | 2794 |
| chrY | 22800 | 0.04% | 152 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 93811 | 13 | 450 | 150.21 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF323BCL.bed.gz | 930.76 KB | 1c2f59da14a34e93720ec101e6f7f1c9 |
| ENCFF323BCL.tabix.bed.gz | 795.79 KB | 3b151977d58a54c285100abc4e50c5ee |
| ENCFF323BCL.tabix.bed.gz.tbi | 436.98 KB | 344de0373e2b2a916d90953291f69998 |
| genomic_resource.yaml | 1.37 KB | b151c071f5e08b79f3e0976b5acd4aba |
| statistics/ |
