Resource

Id DNase-seq/ENCSR846CTAcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR846CTA [biosample_summary="Homo sapiens right lung tissue male embryo (105 days)"]
Description
Labels
  • accession: ENCSR846CTA
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002167/
  • biosample_summary: Homo sapiens right lung tissue male embryo (105 days)
  • date_created: 2015-09-16T21:42:52.263293+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR846CTA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR846CTA float

DNase-seq_ENCSR846CTA
DNase-seq ENCSR846CTA [biosample_summary="Homo sapiens right lung tissue male embryo (105 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR846CTA [2, 2.29e+03]
n
16,519,946
mean
53.2
sd
50.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 165199460.51% 109606
chr1 1439998 0.58% 9556
chr2 1393913 0.58% 9249
chr3 1144951 0.58% 7599
chr4 946269 0.50% 6263
chr5 996704 0.55% 6602
chr6 1040490 0.61% 6906
chr7 862090 0.54% 5722
chr8 806165 0.56% 5343
chr9 686932 0.50% 4554
chr10 809837 0.61% 5374
chr11 807737 0.60% 5373
chr12 822038 0.62% 5454
chr13 527008 0.46% 3495
chr14 509632 0.48% 3380
chr15 530210 0.52% 3516
chr16 439633 0.49% 2917
chr17 596058 0.72% 3960
chr18 415426 0.52% 2752
chr19 442975 0.76% 2946
chr20 386309 0.60% 2569
chr21 196125 0.42% 1303
chr22 238381 0.47% 1584
chrX 458037 0.29% 3035
chrY 23028 0.04% 154
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 109606 2 538 150.72 150
global segment-length histogram

Files

Filename Size md5
ENCFF036PGY.bed.gz 1.03 MB d3cf1c16886032d1203fa305345eb2a3
ENCFF036PGY.tabix.bed.gz 909.47 KB 8bf3f04141d433ec92a42f39c6a0246b
ENCFF036PGY.tabix.bed.gz.tbi 478.16 KB aabf4db802ab9b3b7f2de71b4a0f063e
genomic_resource.yaml 1.39 KB abf090ab0c265555dc82429f89aa86c8
statistics/