Resource

Id DNase-seq/ENCSR845MEJcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR845MEJ [biosample_summary="Homo sapiens right lung tissue female embryo (117 days)"]
Description
Labels
  • accession: ENCSR845MEJ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002167/
  • biosample_summary: Homo sapiens right lung tissue female embryo (117 days)
  • date_created: 2015-09-16T21:42:52.183890+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR845MEJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (117 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR845MEJ float

DNase-seq_ENCSR845MEJ
DNase-seq ENCSR845MEJ [biosample_summary="Homo sapiens right lung tissue female embryo (117 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR845MEJ [0.252, 12.6]
n
9,169,710
mean
2.65
sd
1.89

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 91697100.29% 47064
chr1 853414 0.34% 4315
chr2 738335 0.30% 3749
chr3 600819 0.30% 3114
chr4 475327 0.25% 2444
chr5 510127 0.28% 2622
chr6 547543 0.32% 2762
chr7 459672 0.29% 2380
chr8 422939 0.29% 2221
chr9 384759 0.28% 1968
chr10 452040 0.34% 2325
chr11 443572 0.33% 2280
chr12 469733 0.35% 2426
chr13 241793 0.21% 1280
chr14 284458 0.27% 1457
chr15 298830 0.29% 1523
chr16 287288 0.32% 1461
chr17 380325 0.46% 1944
chr18 193026 0.24% 1026
chr19 397043 0.68% 1914
chr20 236146 0.37% 1255
chr21 96964 0.21% 516
chr22 153429 0.30% 812
chrX 241866 0.16% 1268
chrY 262 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47064 2 920 194.83 180
global segment-length histogram

Files

Filename Size md5
ENCFF138YDL.bed.gz 489.76 KB e5b6d65ba51a79ada47c50488f27f5b4
ENCFF138YDL.tabix.bed.gz 440.67 KB ef3d2450c7c54ea7714f6e73038b3d24
ENCFF138YDL.tabix.bed.gz.tbi 267.44 KB 2daf782259248bc61472820b054e23b0
genomic_resource.yaml 1.84 KB 635bfc08f4fefc336b9e8872ee4e572c
statistics/