Resource

Id DNase-seq/ENCSR803VCRcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR803VCR [biosample_summary="Homo sapiens left lung tissue female embryo (91 days)"]
Description
Labels
  • accession: ENCSR803VCR
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue female embryo (91 days)
  • date_created: 2015-09-16T21:42:55.029406+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR803VCR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (91 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR803VCR float

DNase-seq_ENCSR803VCR

DNase-seq ENCSR803VCR [biosample_summary="Homo sapiens left lung tissue female embryo (91 days)"]
HISTOGRAM FOR DNase-seq_ENCSR803VCR [0.242, 18.5]
n
12,425,440
mean
3.02
sd
2.63

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 124254400.39% 64188
chr1 1135491 0.46% 5813
chr2 981536 0.41% 5103
chr3 822260 0.41% 4226
chr4 635588 0.33% 3283
chr5 689761 0.38% 3562
chr6 758332 0.44% 3900
chr7 644753 0.40% 3400
chr8 567496 0.39% 2978
chr9 517270 0.37% 2672
chr10 610648 0.46% 3171
chr11 631575 0.47% 3238
chr12 623670 0.47% 3221
chr13 329665 0.29% 1732
chr14 400845 0.37% 2051
chr15 406429 0.40% 2113
chr16 390952 0.43% 2017
chr17 507382 0.61% 2591
chr18 270143 0.34% 1405
chr19 519136 0.89% 2489
chr20 309577 0.48% 1682
chr21 125579 0.27% 669
chr22 201881 0.40% 1064
chrX 345311 0.22% 1807
chrY 160 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64188 1 940 193.58 180
global segment-length histogram

Files

Filename Size md5
ENCFF624WLO.bed.gz 677.24 KB e1a75257a8069e6005c4f7c03753d33f
ENCFF624WLO.tabix.bed.gz 610.92 KB f4bf1deb089fc204156e88c5a5817568
ENCFF624WLO.tabix.bed.gz.tbi 338.01 KB b9f1ea4a54eeb0a1d9ee3c78d7c1ec19
genomic_resource.yaml 1.83 KB a1534450e0045b63ab9f76b36f2a974a
statistics/