Resource

Id DNase-seq/ENCSR792ZXAcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR792ZXA [biosample_summary="Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)"]
Description
Labels
  • accession: ENCSR792ZXA
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002113/
  • biosample_summary: Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)
  • date_created: 2017-06-26T18:41:29.731033+00:00
  • date_released: 2017-12-13
  • doi: 10.17989/ENCSR792ZXA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary: embryo (59 days) female embryo (59 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR792ZXA float

DNase-seq_ENCSR792ZXA
DNase-seq ENCSR792ZXA [biosample_summary="Homo sapiens kidney tissue embryo (59 days) and female embryo (59 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR792ZXA [4, 3e+04]
n
39,560,797
mean
191
sd
370

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 395607971.23% 263190
chr1 3581214 1.44% 23820
chr2 3365101 1.39% 22392
chr3 1991390 1.00% 13237
chr4 1570446 0.83% 10446
chr5 1877642 1.03% 12488
chr6 1868793 1.09% 12437
chr7 1954284 1.23% 13005
chr8 1632444 1.12% 10853
chr9 1822071 1.32% 12130
chr10 2129318 1.59% 14169
chr11 2297338 1.70% 15287
chr12 1659002 1.24% 11035
chr13 870362 0.76% 5787
chr14 1361523 1.27% 9062
chr15 1323857 1.30% 8809
chr16 1537140 1.70% 10226
chr17 2073873 2.49% 13796
chr18 874791 1.09% 5817
chr19 1800920 3.07% 11988
chr20 1257524 1.95% 8363
chr21 671225 1.44% 4466
chr22 1217025 2.39% 8105
chrX 779461 0.50% 5182
chrY 44053 0.08% 290
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 263190 4 450 150.31 150
global segment-length histogram

Files

Filename Size md5
ENCFF215RET.bed.gz 2.47 MB 61037b6a1922875d7cbeb7e8dbabf46c
ENCFF215RET.tabix.bed.gz 2.12 MB 7ce01b3a806c81ed242bf40a7f7035f1
ENCFF215RET.tabix.bed.gz.tbi 534.66 KB 03f647d5b3e8902d95f707e54fe99099
genomic_resource.yaml 1.48 KB 1b1643e0313e7676d40abd239e860609
statistics/