Resource

Id DNase-seq/ENCSR786FWFcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR786FWF [biosample_summary="Homo sapiens muscle of back tissue male embryo (127 days)"]
Description
Labels
  • accession: ENCSR786FWF
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002324/
  • biosample_summary: Homo sapiens muscle of back tissue male embryo (127 days)
  • date_created: 2015-09-16T21:42:58.393176+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR786FWF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (127 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR786FWF float

DNase-seq_ENCSR786FWF
DNase-seq ENCSR786FWF [biosample_summary="Homo sapiens muscle of back tissue male embryo (127 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR786FWF [3, 1.46e+03]
n
10,549,264
mean
40.7
sd
37.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 105492640.33% 69986
chr1 923338 0.37% 6135
chr2 858302 0.35% 5689
chr3 701405 0.35% 4656
chr4 561739 0.30% 3717
chr5 608471 0.34% 4026
chr6 671289 0.39% 4458
chr7 537255 0.34% 3557
chr8 528427 0.36% 3499
chr9 451083 0.33% 2992
chr10 515190 0.39% 3425
chr11 543871 0.40% 3605
chr12 524703 0.39% 3485
chr13 310840 0.27% 2059
chr14 343954 0.32% 2290
chr15 328176 0.32% 2179
chr16 304694 0.34% 2023
chr17 394924 0.47% 2626
chr18 248533 0.31% 1644
chr19 334345 0.57% 2226
chr20 256077 0.40% 1699
chr21 126060 0.27% 834
chr22 167060 0.33% 1112
chrX 295578 0.19% 1957
chrY 13950 0.02% 93
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 69986 3 450 150.73 150
global segment-length histogram

Files

Filename Size md5
ENCFF171JLD.bed.gz 675.37 KB a2cf86cb08f7e79c664e8d6963fbb6df
ENCFF171JLD.tabix.bed.gz 578.54 KB f2377ee3e8cd5bddd6adbee844f7363e
ENCFF171JLD.tabix.bed.gz.tbi 348.49 KB 76060eb21585f7c43f229601db49498c
genomic_resource.yaml 1.4 KB e8c633b41f8ff114f5b4e6df339615a5
statistics/