Resource

Id DNase-seq/ENCSR770OTBcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR770OTB [biosample_summary="Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)"]
Description
Labels
  • accession: ENCSR770OTB
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0000493/
  • biosample_summary: Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)
  • date_created: 2019-09-12T18:22:18.251361+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR770OTB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR770OTB float

DNase-seq_ENCSR770OTB
DNase-seq ENCSR770OTB [biosample_summary="Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR770OTB [0.0581, 48.6]
n
16,933,066
mean
3.23
sd
4.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 169330660.53% 91826
chr1 1564777 0.63% 8432
chr2 1252706 0.52% 6876
chr3 936586 0.47% 5121
chr4 617533 0.32% 3329
chr5 797080 0.44% 4405
chr6 794109 0.46% 4382
chr7 839608 0.53% 4591
chr8 726646 0.50% 4007
chr9 810486 0.59% 4359
chr10 820504 0.61% 4532
chr11 1008702 0.75% 5386
chr12 742549 0.56% 4036
chr13 342036 0.30% 1894
chr14 584380 0.55% 3126
chr15 543027 0.53% 3004
chr16 695319 0.77% 3748
chr17 951730 1.14% 5083
chr18 289585 0.36% 1626
chr19 863728 1.47% 4485
chr20 530375 0.82% 2891
chr21 292818 0.63% 1498
chr22 528567 1.04% 2828
chrX 387220 0.25% 2113
chrY 12995 0.02% 74
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 91826 1 840 184.4 180
global segment-length histogram

Files

Filename Size md5
ENCFF003CAJ.bed.gz 1006.15 KB f1a0f15a742eded735af333e8728577b
ENCFF003CAJ.tabix.bed.gz 923.79 KB c3981b9c4febf3040f24b615186f9068
ENCFF003CAJ.tabix.bed.gz.tbi 331.47 KB 9a6e775faec5b003c6d794861d8a9033
genomic_resource.yaml 1.28 KB 298be2e2b2a53caf2a4b72e12aa0f12e
statistics/