Resource

Id DNase-seq/ENCSR768OLLcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR768OLL [biosample_summary="Homo sapiens right kidney tissue male embryo (91 days)"]
Description
Labels
  • accession: ENCSR768OLL
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004539/
  • biosample_summary: Homo sapiens right kidney tissue male embryo (91 days)
  • date_created: 2015-03-28T06:54:56.110744+00:00
  • date_released: 2016-05-09
  • doi: 10.17989/ENCSR768OLL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (91 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR768OLL float

DNase-seq_ENCSR768OLL
DNase-seq ENCSR768OLL [biosample_summary="Homo sapiens right kidney tissue male embryo (91 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR768OLL [6, 1.96e+04]
n
32,813,260
mean
159
sd
223

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 328132601.02% 217992
chr1 2951449 1.19% 19623
chr2 2663142 1.10% 17677
chr3 1946498 0.98% 12918
chr4 1597008 0.84% 10610
chr5 1729200 0.95% 11476
chr6 1880976 1.10% 12513
chr7 1685604 1.06% 11189
chr8 1445244 1.00% 9599
chr9 1440150 1.04% 9556
chr10 1672033 1.25% 11117
chr11 1701873 1.26% 11292
chr12 1586780 1.19% 10540
chr13 875514 0.77% 5816
chr14 1060081 0.99% 7035
chr15 1050656 1.03% 6989
chr16 1187521 1.31% 7898
chr17 1518232 1.82% 10112
chr18 803943 1.00% 5340
chr19 1163832 1.99% 7740
chr20 882799 1.37% 5871
chr21 396895 0.85% 2633
chr22 658347 1.30% 4375
chrX 876591 0.56% 5818
chrY 38892 0.07% 255
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 217992 1 450 150.53 150
global segment-length histogram

Files

Filename Size md5
ENCFF230IMJ.bed.gz 2.05 MB b93455057080fca63c22053066740ba3
ENCFF230IMJ.tabix.bed.gz 1.76 MB ceb47507881038fc8cc89d3187fccc05
ENCFF230IMJ.tabix.bed.gz.tbi 561.6 KB 9aef05bc3805fd819b10a6e902b2bab8
genomic_resource.yaml 1.39 KB ca76883cc794e541e985ddde35884431
statistics/