Resource

Id DNase-seq/ENCSR747SEUcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR747SEU [biosample_summary="Homo sapiens heart left ventricle tissue female adult (46 years)"]
Description
Labels
  • accession: ENCSR747SEU
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (46 years)
  • date_created: 2019-11-01T19:05:03.960316+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR747SEU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (46 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR747SEU float

DNase-seq_ENCSR747SEU
DNase-seq ENCSR747SEU [biosample_summary="Homo sapiens heart left ventricle tissue female adult (46 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR747SEU [0.0351, 50.1]
n
25,432,186
mean
2.32
sd
3.63

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 254321860.79% 140851
chr1 2344593 0.94% 12919
chr2 1836166 0.76% 10322
chr3 1425284 0.72% 8012
chr4 914799 0.48% 5122
chr5 1179897 0.65% 6717
chr6 1082652 0.63% 6155
chr7 1270870 0.80% 7117
chr8 1202235 0.83% 6712
chr9 1266638 0.92% 6887
chr10 1305672 0.98% 7308
chr11 1527947 1.13% 8287
chr12 1127541 0.85% 6243
chr13 493984 0.43% 2807
chr14 837528 0.78% 4562
chr15 832933 0.82% 4657
chr16 1056200 1.17% 5784
chr17 1456554 1.75% 7943
chr18 431369 0.54% 2489
chr19 1197382 2.04% 6271
chr20 852466 1.32% 4723
chr21 435996 0.93% 2344
chr22 822717 1.62% 4461
chrX 529350 0.34% 2996
chrY 1413 <0.01% 13
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 140851 2 1160 180.56 178
global segment-length histogram

Files

Filename Size md5
ENCFF591LZL.bed.gz 1.5 MB 21d0834158aa49c0c3d68e744dd292b3
ENCFF591LZL.tabix.bed.gz 1.37 MB fd0fd95921b689434f48bd045a48e18b
ENCFF591LZL.tabix.bed.gz.tbi 411.18 KB c0a75db962c8189e9eeedeb340e30879
genomic_resource.yaml 1.25 KB dd0f32e003557766e3cb3d296cbdcd1f
statistics/