Resource

Id DNase-seq/ENCSR735BIMcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR735BIM [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (43 years)"]
Description
Labels
  • accession: ENCSR735BIM
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive male adult (43 years)
  • date_created: 2015-09-16T21:42:08.571486+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR735BIM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (43 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR735BIM float

DNase-seq_ENCSR735BIM
DNase-seq ENCSR735BIM [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (43 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR735BIM [0.207, 52.6]
n
10,683,985
mean
4.31
sd
4.72

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 106839850.33% 59111
chr1 1004430 0.40% 5548
chr2 833156 0.34% 4623
chr3 714958 0.36% 3983
chr4 523266 0.28% 2908
chr5 567114 0.31% 3111
chr6 685366 0.40% 3802
chr7 540373 0.34% 3029
chr8 480437 0.33% 2684
chr9 429298 0.31% 2386
chr10 505927 0.38% 2827
chr11 514376 0.38% 2853
chr12 561938 0.42% 3090
chr13 289429 0.25% 1611
chr14 348351 0.33% 1920
chr15 336827 0.33% 1884
chr16 327753 0.36% 1808
chr17 456108 0.55% 2512
chr18 222749 0.28% 1259
chr19 458662 0.78% 2373
chr20 264399 0.41% 1480
chr21 127858 0.27% 708
chr22 188530 0.37% 1045
chrX 289839 0.19% 1594
chrY 12841 0.02% 73
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 59111 4 745 180.74 180
global segment-length histogram

Files

Filename Size md5
ENCFF752XGR.bed.gz 632.73 KB 3f80bf4ef8fc54b1ae784ca34520fac1
ENCFF752XGR.tabix.bed.gz 563.87 KB 6da18caa7f21ef7780b0477b7c7edfb5
ENCFF752XGR.tabix.bed.gz.tbi 327.23 KB 7875a42a73bd4c1b2f1a9cf88cdd3096
genomic_resource.yaml 1.9 KB a136576559c2d2379ae6aa7929adfadf
statistics/