Resource

Id DNase-seq/ENCSR723VNGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR723VNG [biosample_summary="Homo sapiens left lung tissue male adult (40 years)"]
Description
Labels
  • accession: ENCSR723VNG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male adult (40 years)
  • date_created: 2019-02-01T20:13:16.858769+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR723VNG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR723VNG float

DNase-seq_ENCSR723VNG

DNase-seq ENCSR723VNG [biosample_summary="Homo sapiens left lung tissue male adult (40 years)"]
HISTOGRAM FOR DNase-seq_ENCSR723VNG [0.0347, 19.6]
n
43,276,001
mean
0.985
sd
1.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 432760011.35% 221104
chr1 3390038 1.36% 17186
chr2 2920602 1.21% 15524
chr3 2056628 1.04% 11045
chr4 2165201 1.14% 11334
chr5 1900592 1.05% 10194
chr6 1497135 0.88% 8504
chr7 2738449 1.72% 13892
chr8 1892318 1.30% 9675
chr9 2333449 1.69% 11522
chr10 1866738 1.40% 9586
chr11 2530804 1.87% 12597
chr12 1720131 1.29% 8969
chr13 904912 0.79% 4879
chr14 1499384 1.40% 7436
chr15 1029703 1.01% 5477
chr16 2125728 2.35% 10362
chr17 2734600 3.28% 13479
chr18 652482 0.81% 3575
chr19 2574531 4.39% 12743
chr20 1331491 2.07% 6412
chr21 891256 1.91% 4367
chr22 1940059 3.82% 9305
chrX 547263 0.35% 2840
chrY 32507 0.06% 201
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 221104 1 1280 195.73 180
global segment-length histogram

Files

Filename Size md5
ENCFF349QTP.bed.gz 2.19 MB bbf09d2a67f2e90f083280b90491bc5d
ENCFF349QTP.tabix.bed.gz 2.05 MB 0f99a2e5e51580015554a0db2ebecc8e
ENCFF349QTP.tabix.bed.gz.tbi 446.68 KB 0d11b562987c9f4b8ebca0348620ae8a
genomic_resource.yaml 1.21 KB d756302257ebed68ac96168bb9f4bb11
statistics/