Resource
| Id | DNase-seq/ENCSR714DIF |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR714DIF [biosample_summary="Homo sapiens mesendoderm originated from H1"] |
| Description |
status: released biological_replicates: Rep 1 summary: male embryo output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR714DIF | float |
DNase-seq_ENCSR714DIF |
DNase-seq ENCSR714DIF [biosample_summary="Homo sapiens mesendoderm originated from H1"]
|
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[0.0288, 29.5] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 55490709 | 1.72% | 285272 |
| chr1 | 4911943 | 1.97% | 24901 |
| chr2 | 4538350 | 1.87% | 23456 |
| chr3 | 3663597 | 1.85% | 19089 |
| chr4 | 3172290 | 1.67% | 16584 |
| chr5 | 3297815 | 1.82% | 17026 |
| chr6 | 3304289 | 1.93% | 17013 |
| chr7 | 2881938 | 1.81% | 14938 |
| chr8 | 2682384 | 1.85% | 13830 |
| chr9 | 2278145 | 1.65% | 11634 |
| chr10 | 2643727 | 1.98% | 13594 |
| chr11 | 2809104 | 2.08% | 14379 |
| chr12 | 2715464 | 2.04% | 13860 |
| chr13 | 1649935 | 1.44% | 8606 |
| chr14 | 1749164 | 1.63% | 8917 |
| chr15 | 1665895 | 1.63% | 8513 |
| chr16 | 1687825 | 1.87% | 8606 |
| chr17 | 2007111 | 2.41% | 10098 |
| chr18 | 1403550 | 1.75% | 7278 |
| chr19 | 1569397 | 2.68% | 7698 |
| chr20 | 1355862 | 2.10% | 6918 |
| chr21 | 584265 | 1.25% | 3055 |
| chr22 | 859134 | 1.69% | 4347 |
| chrX | 1954790 | 1.25% | 10353 |
| chrY | 104735 | 0.18% | 579 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 285272 | 1 | 961 | 194.52 | 200 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF476ZZV.bed.gz | 3.02 MB | 35a563069119a6ad743255d747699750 |
| ENCFF476ZZV.tabix.bed.gz | 2.76 MB | d04bf4665a14e469d6c4f9299b769e5c |
| ENCFF476ZZV.tabix.bed.gz.tbi | 820.46 KB | b352682126a6f0a2cb8ff7028010f826 |
| genomic_resource.yaml | 1.18 KB | 40677d05e7f07f0ea3266c39ef2f2adb |
| statistics/ |
