Resource

Id DNase-seq/ENCSR704HNGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR704HNG [biosample_summary="Homo sapiens natural killer cell male adult (21 years)"]
Description
Labels
  • accession: ENCSR704HNG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000623/
  • biosample_summary: Homo sapiens natural killer cell male adult (21 years)
  • date_created: 2015-09-16T21:42:04.836703+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR704HNG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR704HNG float

DNase-seq_ENCSR704HNG
DNase-seq ENCSR704HNG [biosample_summary="Homo sapiens natural killer cell male adult (21 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR704HNG [0.0124, 80.8]
n
27,088,070
mean
3
sd
6.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 270880700.84% 134160
chr1 2651717 1.07% 13062
chr2 2037282 0.84% 10194
chr3 1500167 0.76% 7529
chr4 1002949 0.53% 5065
chr5 1277587 0.70% 6414
chr6 1670005 0.98% 8156
chr7 1286431 0.81% 6471
chr8 1021144 0.70% 5146
chr9 1060263 0.77% 5298
chr10 1232618 0.92% 6107
chr11 1426525 1.06% 6966
chr12 1347411 1.01% 6709
chr13 623326 0.55% 3063
chr14 990351 0.93% 4869
chr15 892247 0.87% 4430
chr16 1012603 1.12% 4990
chr17 1559474 1.87% 7535
chr18 479170 0.60% 2395
chr19 1460284 2.49% 6964
chr20 713244 1.11% 3574
chr21 322792 0.69% 1608
chr22 605859 1.19% 3024
chrX 866833 0.56% 4345
chrY 47788 0.08% 246
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 134160 1 1100 201.91 180
global segment-length histogram

Files

Filename Size md5
ENCFF886GET.bed.gz 1.48 MB 3d1332ae210c045d492e6ad74d4454c3
ENCFF886GET.tabix.bed.gz 1.36 MB 7b2caff9a447c7813d93828dacb5e2cf
ENCFF886GET.tabix.bed.gz.tbi 400.13 KB 93247a143eb31bbacaf28d328533bda3
genomic_resource.yaml 1.22 KB 4051ccc58c94d1e9ad6c44665817b060
statistics/