Resource

Id DNase-seq/ENCSR696ZDWcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR696ZDW [biosample_summary="Homo sapiens immature natural killer cell"]
Description
Labels
  • accession: ENCSR696ZDW
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000823/
  • biosample_summary: Homo sapiens immature natural killer cell
  • date_created: 2022-02-07T22:20:21.241401+00:00
  • date_released: 2022-04-08
  • doi: 10.17989/ENCSR696ZDW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR696ZDW float

DNase-seq_ENCSR696ZDW

DNase-seq ENCSR696ZDW [biosample_summary="Homo sapiens immature natural killer cell"]
HISTOGRAM FOR DNase-seq_ENCSR696ZDW [0.064, 65.3]
n
15,433,214
mean
4.9
sd
7.75

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 154332140.48% 75980
chr1 1505859 0.60% 7410
chr2 1154861 0.48% 5715
chr3 861216 0.43% 4275
chr4 579137 0.30% 2854
chr5 718786 0.40% 3578
chr6 930634 0.54% 4548
chr7 745474 0.47% 3708
chr8 598122 0.41% 2951
chr9 643983 0.47% 3184
chr10 719313 0.54% 3529
chr11 759255 0.56% 3791
chr12 765188 0.57% 3794
chr13 332548 0.29% 1621
chr14 530441 0.50% 2619
chr15 504342 0.49% 2536
chr16 590115 0.65% 2859
chr17 859298 1.03% 4154
chr18 296057 0.37% 1443
chr19 877723 1.50% 4208
chr20 435565 0.68% 2172
chr21 186425 0.40% 933
chr22 352525 0.69% 1730
chrX 485997 0.31% 2365
chrY 350 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75980 4 980 203.12 200
global segment-length histogram

Files

Filename Size md5
ENCFF759GQR.bed.gz 847.83 KB 02e60048bac369776e13454544388b27
ENCFF759GQR.tabix.bed.gz 777.97 KB d894eb8cb8c12e1ed3a57eb99506d6e7
ENCFF759GQR.tabix.bed.gz.tbi 311.62 KB b46eb8431476c44078fc8630dedae1c0
genomic_resource.yaml 1.14 KB 28fbf8347ea6c6136ba7575908ace77f
statistics/