Resource

Id DNase-seq/ENCSR695AUYcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR695AUY [biosample_summary="Homo sapiens CD14-positive monocyte female adult (34 years)"]
Description
Labels
  • accession: ENCSR695AUY
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte female adult (34 years)
  • date_created: 2015-09-16T21:42:11.156337+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR695AUY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (34 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR695AUY float

DNase-seq_ENCSR695AUY
DNase-seq ENCSR695AUY [biosample_summary="Homo sapiens CD14-positive monocyte female adult (34 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR695AUY [0.331, 35.5]
n
7,500,164
mean
5.13
sd
4.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 75001640.23% 41496
chr1 745795 0.30% 4162
chr2 571005 0.24% 3189
chr3 451698 0.23% 2512
chr4 295332 0.16% 1648
chr5 357637 0.20% 2007
chr6 450330 0.26% 2490
chr7 362806 0.23% 2010
chr8 312056 0.22% 1723
chr9 300505 0.22% 1671
chr10 347344 0.26% 1932
chr11 390590 0.29% 2163
chr12 383023 0.29% 2138
chr13 157248 0.14% 879
chr14 234205 0.22% 1277
chr15 235939 0.23% 1309
chr16 274455 0.30% 1509
chr17 401166 0.48% 2198
chr18 140257 0.17% 800
chr19 407400 0.70% 2146
chr20 224959 0.35% 1242
chr21 96262 0.21% 518
chr22 163424 0.32% 908
chrX 196330 0.13% 1062
chrY 398 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41496 3 760 180.74 180
global segment-length histogram

Files

Filename Size md5
ENCFF205OAA.bed.gz 445.17 KB 281e12dcd708a3daad86f71a9e5d101c
ENCFF205OAA.tabix.bed.gz 397.06 KB 103d2f3618724621bea39f935602c16e
ENCFF205OAA.tabix.bed.gz.tbi 217.75 KB 5007cb4dc7e6bb9807c8a02cb10e95c4
genomic_resource.yaml 1.85 KB a02a9d570bbd05570020175430d5a22a
statistics/