Resource

Id DNase-seq/ENCSR691MQJcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR691MQJ [biosample_summary="Homo sapiens EL"]
Description
Labels
  • accession: ENCSR691MQJ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007749/
  • biosample_summary: Homo sapiens EL
  • date_created: 2014-10-01T04:44:28.953891+00:00
  • date_released: 2016-08-11
  • doi: 10.17989/ENCSR691MQJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR691MQJ float

DNase-seq_ENCSR691MQJ
DNase-seq ENCSR691MQJ [biosample_summary="Homo sapiens EL"]
 HISTOGRAM FOR DNase-seq_ENCSR691MQJ [0.0291, 23.5]
n
44,076,901
mean
1.74
sd
2.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 440769011.37% 222139
chr1 4231964 1.70% 21250
chr2 3709147 1.53% 18826
chr3 2985185 1.51% 15140
chr4 2330710 1.23% 11942
chr5 2589529 1.43% 13095
chr6 2871780 1.68% 14275
chr7 2179219 1.37% 11062
chr8 2060660 1.42% 10419
chr9 1875042 1.35% 9403
chr10 2077646 1.55% 10490
chr11 2180922 1.61% 10913
chr12 2242820 1.68% 11236
chr13 1185563 1.04% 6026
chr14 1324139 1.24% 6658
chr15 1468783 1.44% 7364
chr16 1262304 1.40% 6294
chr17 1783805 2.14% 8878
chr18 928808 1.16% 4740
chr19 1284358 2.19% 6349
chr20 1050458 1.63% 5324
chr21 502089 1.07% 2524
chr22 694147 1.37% 3490
chrX 1203005 0.77% 6152
chrY 54818 0.10% 289
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 222139 1 1040 198.42 200
global segment-length histogram

Files

Filename Size md5
ENCFF650WLM.bed.gz 2.4 MB 50bb8c07a787ba99f0efb3cf59064fbc
ENCFF650WLM.tabix.bed.gz 2.19 MB 225829c5dbcbb7e4c5742222d49b4a88
ENCFF650WLM.tabix.bed.gz.tbi 649.6 KB 0e46a535e9f07e23b2f891e848c3ba09
genomic_resource.yaml 1.06 KB 2549fbc0f86c730668b5e998a673be4b
statistics/