Resource
| Id | DNase-seq/ENCSR685PCS |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR685PCS [biosample_summary="Homo sapiens placenta tissue male embryo"] |
| Description |
status: released biological_replicates: Rep 1 summary: male embryo output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR685PCS | float |
DNase-seq_ENCSR685PCS |
DNase-seq ENCSR685PCS [biosample_summary="Homo sapiens placenta tissue male embryo"]
|
![]() |
[0.022, 49.5] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 66375696 | 2.06% | 337828 |
| chr1 | 6604897 | 2.65% | 33388 |
| chr2 | 5185859 | 2.14% | 26394 |
| chr3 | 3200660 | 1.61% | 16693 |
| chr4 | 2049576 | 1.08% | 10563 |
| chr5 | 2836049 | 1.56% | 14707 |
| chr6 | 2656965 | 1.56% | 14116 |
| chr7 | 3692689 | 2.32% | 18857 |
| chr8 | 2559856 | 1.76% | 13023 |
| chr9 | 3035729 | 2.19% | 15321 |
| chr10 | 3534507 | 2.64% | 17956 |
| chr11 | 3966690 | 2.94% | 19547 |
| chr12 | 2682831 | 2.01% | 14032 |
| chr13 | 1025815 | 0.90% | 5471 |
| chr14 | 2273306 | 2.12% | 11489 |
| chr15 | 2449173 | 2.40% | 12622 |
| chr16 | 3271980 | 3.62% | 16615 |
| chr17 | 4139160 | 4.97% | 20648 |
| chr18 | 993963 | 1.24% | 5274 |
| chr19 | 2738256 | 4.67% | 13732 |
| chr20 | 2590614 | 4.02% | 13006 |
| chr21 | 1171585 | 2.51% | 5754 |
| chr22 | 2645284 | 5.21% | 12707 |
| chrX | 1019842 | 0.65% | 5597 |
| chrY | 50410 | 0.09% | 316 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 337828 | 1 | 1120 | 196.48 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF340FJC.bed.gz | 3.32 MB | a3b7f064eb403c68b49d06d4da788691 |
| ENCFF340FJC.tabix.bed.gz | 3.1 MB | 2e71fcc9d9565715cbad16c67315264d |
| ENCFF340FJC.tabix.bed.gz.tbi | 428.98 KB | 8f8def719be349d48c4daa72ba7cb7a9 |
| genomic_resource.yaml | 1.16 KB | cb66d1f2b72aab77e367cc538c216801 |
| statistics/ |
