Resource

Id DNase-seq/ENCSR581RSOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR581RSO [biosample_summary="Homo sapiens T-cell male adult (34 years)"]
Description
Labels
  • accession: ENCSR581RSO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000084/
  • biosample_summary: Homo sapiens T-cell male adult (34 years)
  • date_created: 2020-04-12T18:59:14.457939+00:00
  • date_released: 2020-09-25
  • doi: 10.17989/ENCSR581RSO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR581RSO float

DNase-seq_ENCSR581RSO

DNase-seq ENCSR581RSO [biosample_summary="Homo sapiens T-cell male adult (34 years)"]
HISTOGRAM FOR DNase-seq_ENCSR581RSO [0.24, 152]
n
9,360,512
mean
8.68
sd
13.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 93605120.29% 53488
chr1 947178 0.38% 5418
chr2 665968 0.27% 3859
chr3 519736 0.26% 2996
chr4 335262 0.18% 1925
chr5 414193 0.23% 2403
chr6 564057 0.33% 3240
chr7 430712 0.27% 2488
chr8 347501 0.24% 1980
chr9 368026 0.27% 2121
chr10 414903 0.31% 2379
chr11 473494 0.35% 2715
chr12 481459 0.36% 2737
chr13 191185 0.17% 1102
chr14 329952 0.31% 1883
chr15 304300 0.30% 1746
chr16 375936 0.42% 2095
chr17 561839 0.67% 3175
chr18 153266 0.19% 893
chr19 590929 1.01% 3246
chr20 264105 0.41% 1531
chr21 116389 0.25% 656
chr22 221952 0.44% 1261
chrX 276153 0.18% 1572
chrY 12017 0.02% 67
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 53488 2 639 175 171
global segment-length histogram

Files

Filename Size md5
ENCFF063HRQ.bed.gz 599.31 KB 9d2fad1d25653f669850c54a6a99b0a1
ENCFF063HRQ.tabix.bed.gz 543.23 KB 02a5dfcbae9b64c63f9148a40c7cba98
ENCFF063HRQ.tabix.bed.gz.tbi 250.28 KB d5de69c09913f96ef21ebb6cfdd96580
genomic_resource.yaml 1.18 KB 683254cd2af7f54387eaf844b4e99a07
statistics/