Resource

Id DNase-seq/ENCSR567EEOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR567EEO [biosample_summary="Homo sapiens spleen tissue female adult (61 years)"]
Description
Labels
  • accession: ENCSR567EEO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (61 years)
  • date_created: 2019-02-01T21:50:16.322032+00:00
  • date_released: 2020-10-02
  • doi: 10.17989/ENCSR567EEO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR567EEO float

DNase-seq_ENCSR567EEO
DNase-seq ENCSR567EEO [biosample_summary="Homo sapiens spleen tissue female adult (61 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR567EEO [0.0286, 28]
n
53,681,802
mean
0.866
sd
1.69

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 536818021.67% 252823
chr1 4674015 1.88% 21982
chr2 4313248 1.78% 20108
chr3 2533589 1.28% 12128
chr4 1685322 0.89% 7875
chr5 2245605 1.24% 10743
chr6 1867515 1.09% 9175
chr7 3253402 2.04% 15220
chr8 2159939 1.49% 9933
chr9 2332838 1.69% 11002
chr10 3112660 2.33% 14547
chr11 3300442 2.44% 15227
chr12 2205151 1.65% 10589
chr13 808807 0.71% 3856
chr14 1772948 1.66% 8292
chr15 1744942 1.71% 8320
chr16 2736136 3.03% 12935
chr17 3253136 3.91% 15343
chr18 827477 1.03% 3898
chr19 2285324 3.90% 10753
chr20 2024249 3.14% 9497
chr21 941267 2.02% 4344
chr22 2176432 4.28% 10068
chrX 1424280 0.91% 6963
chrY 3078 0.01% 25
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 252823 1 1100 212.33 200
global segment-length histogram

Files

Filename Size md5
ENCFF737OQO.bed.gz 2.43 MB eb5a6fcbde5f2646acc3d0bb0e7320fc
ENCFF737OQO.tabix.bed.gz 2.31 MB add987be4ab2c59428cfdee8adacec1a
ENCFF737OQO.tabix.bed.gz.tbi 325.24 KB 9855f91a16660703bb7839a9e4a94a11
genomic_resource.yaml 1.21 KB 9c05959cbd4ba3354fc7d52e2abf0b31
statistics/