Resource

Id DNase-seq/ENCSR545ADKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR545ADK [biosample_summary="Homo sapiens uterus tissue female adult (59 years)"]
Description
Labels
  • accession: ENCSR545ADK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000995/
  • biosample_summary: Homo sapiens uterus tissue female adult (59 years)
  • date_created: 2019-04-10T20:33:46.923619+00:00
  • date_released: 2020-10-02
  • doi: 10.17989/ENCSR545ADK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR545ADK float

DNase-seq_ENCSR545ADK

DNase-seq ENCSR545ADK [biosample_summary="Homo sapiens uterus tissue female adult (59 years)"]
HISTOGRAM FOR DNase-seq_ENCSR545ADK [0.0524, 38.8]
n
18,767,965
mean
2.78
sd
3.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 187679650.58% 90482
chr1 1806136 0.73% 8663
chr2 1485813 0.61% 7218
chr3 1011089 0.51% 4934
chr4 689597 0.36% 3358
chr5 869883 0.48% 4263
chr6 926576 0.54% 4492
chr7 828463 0.52% 4058
chr8 739300 0.51% 3645
chr9 903648 0.65% 4325
chr10 999288 0.75% 4821
chr11 1108873 0.82% 5238
chr12 854107 0.64% 4154
chr13 367990 0.32% 1828
chr14 637638 0.60% 3110
chr15 658636 0.65% 3210
chr16 722638 0.80% 3450
chr17 1141460 1.37% 5352
chr18 357897 0.45% 1743
chr19 908497 1.55% 4186
chr20 537579 0.83% 2625
chr21 269277 0.58% 1254
chr22 498826 0.98% 2398
chrX 444575 0.28% 2155
chrY 179 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90482 1 1100 207.42 200
global segment-length histogram

Files

Filename Size md5
ENCFF372MHJ.bed.gz 984.52 KB 24a62bb6a832e86ee25c39f2e0316218
ENCFF372MHJ.tabix.bed.gz 902.62 KB a78d7813d5f1f4f834ecd57880bab2e0
ENCFF372MHJ.tabix.bed.gz.tbi 309.94 KB 1ea0af22006a90e728daa51b111b4142
genomic_resource.yaml 1.21 KB 143d9c157a6e0d48fa5ff59ef5a54837
statistics/