Resource
| Id | DNase-seq/ENCSR526TFD |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR526TFD [biosample_summary="Homo sapiens CD4-positive, alpha-beta memory T cell"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR526TFD | float |
DNase-seq_ENCSR526TFD |
DNase-seq ENCSR526TFD [biosample_summary="Homo sapiens CD4-positive, alpha-beta memory T cell"]
|
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[0.0993, 68.5] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 13150608 | 0.41% | 65515 |
| chr1 | 1326105 | 0.53% | 6546 |
| chr2 | 959782 | 0.40% | 4779 |
| chr3 | 741159 | 0.37% | 3724 |
| chr4 | 500332 | 0.26% | 2502 |
| chr5 | 630064 | 0.35% | 3124 |
| chr6 | 816922 | 0.48% | 4020 |
| chr7 | 615701 | 0.39% | 3103 |
| chr8 | 498968 | 0.34% | 2546 |
| chr9 | 517908 | 0.37% | 2607 |
| chr10 | 619646 | 0.46% | 3048 |
| chr11 | 658624 | 0.49% | 3338 |
| chr12 | 682386 | 0.51% | 3386 |
| chr13 | 291662 | 0.26% | 1447 |
| chr14 | 464183 | 0.43% | 2293 |
| chr15 | 424100 | 0.42% | 2132 |
| chr16 | 486977 | 0.54% | 2449 |
| chr17 | 732696 | 0.88% | 3639 |
| chr18 | 234947 | 0.29% | 1153 |
| chr19 | 716076 | 1.22% | 3473 |
| chr20 | 350110 | 0.54% | 1759 |
| chr21 | 152826 | 0.33% | 763 |
| chr22 | 286550 | 0.56% | 1449 |
| chrX | 442884 | 0.28% | 2235 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 65515 | 2 | 1080 | 200.73 | 198 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF985UCI.bed.gz | 727.15 KB | 8bcac6269ecb9e92c8c55f8a0529d184 |
| ENCFF985UCI.tabix.bed.gz | 667.38 KB | d58d2606b63de99f5d527af1936cf24d |
| ENCFF985UCI.tabix.bed.gz.tbi | 286.6 KB | ec1e24f4b0405ad6805139b2b90ba496 |
| genomic_resource.yaml | 1.17 KB | 94a9231f800d23e74d1e0a990f3e2e41 |
| statistics/ |
