Resource

Id DNase-seq/ENCSR510ITBcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR510ITB [biosample_summary="Homo sapiens left lung tissue male embryo (91 days)"]
Description
Labels
  • accession: ENCSR510ITB
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male embryo (91 days)
  • date_created: 2015-09-16T21:42:54.686522+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR510ITB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (91 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR510ITB float

DNase-seq_ENCSR510ITB

DNase-seq ENCSR510ITB [biosample_summary="Homo sapiens left lung tissue male embryo (91 days)"]
HISTOGRAM FOR DNase-seq_ENCSR510ITB [0.357, 41.9]
n
9,311,085
mean
4.27
sd
4.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 93110850.29% 54810
chr1 842806 0.34% 4934
chr2 746559 0.31% 4419
chr3 621337 0.31% 3696
chr4 484836 0.25% 2900
chr5 523295 0.29% 3140
chr6 554445 0.32% 3300
chr7 485019 0.30% 2894
chr8 430810 0.30% 2550
chr9 382974 0.28% 2251
chr10 447783 0.33% 2693
chr11 473581 0.35% 2787
chr12 461191 0.35% 2697
chr13 251659 0.22% 1511
chr14 296019 0.28% 1742
chr15 303445 0.30% 1795
chr16 302509 0.33% 1721
chr17 388559 0.47% 2251
chr18 207271 0.26% 1242
chr19 377907 0.64% 1986
chr20 227946 0.35% 1342
chr21 108458 0.23% 643
chr22 157802 0.31% 923
chrX 226248 0.14% 1340
chrY 8626 0.02% 53
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 54810 1 720 169.88 160
global segment-length histogram

Files

Filename Size md5
ENCFF750EJO.bed.gz 583.59 KB 025f9c1fd4e28a085761729a7db987ed
ENCFF750EJO.tabix.bed.gz 515.43 KB 99be1c6a23e426f44ba1d42bf60c6214
ENCFF750EJO.tabix.bed.gz.tbi 326.57 KB 90ab550857b5d85e9624d48d498c6a63
genomic_resource.yaml 1.82 KB 35cc07b899aded12a69fd9cf17231a32
statistics/