Resource
| Id | DNase-seq/ENCSR506QJJ |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR506QJJ [biosample_summary="Homo sapiens SJCRH30"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR506QJJ | float |
DNase-seq_ENCSR506QJJ |
DNase-seq ENCSR506QJJ [biosample_summary="Homo sapiens SJCRH30"]
|
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[0.0546, 380] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 27170369 | 0.84% | 141359 |
| chr1 | 2629906 | 1.06% | 13523 |
| chr2 | 2214805 | 0.91% | 11635 |
| chr3 | 1523050 | 0.77% | 8084 |
| chr4 | 1263736 | 0.66% | 6738 |
| chr5 | 1356936 | 0.75% | 7222 |
| chr6 | 1491722 | 0.87% | 7841 |
| chr7 | 1371041 | 0.86% | 7197 |
| chr8 | 1018560 | 0.70% | 5434 |
| chr9 | 1341813 | 0.97% | 6933 |
| chr10 | 1208513 | 0.90% | 6314 |
| chr11 | 1327017 | 0.98% | 6856 |
| chr12 | 1391447 | 1.04% | 7160 |
| chr13 | 677239 | 0.59% | 3621 |
| chr14 | 876220 | 0.82% | 4571 |
| chr15 | 937953 | 0.92% | 4838 |
| chr16 | 968651 | 1.07% | 4922 |
| chr17 | 1401581 | 1.68% | 7049 |
| chr18 | 441620 | 0.55% | 2360 |
| chr19 | 1101251 | 1.88% | 5489 |
| chr20 | 865947 | 1.34% | 4404 |
| chr21 | 314942 | 0.67% | 1669 |
| chr22 | 598808 | 1.18% | 3015 |
| chrX | 839668 | 0.54% | 4434 |
| chrY | 7943 | 0.01% | 50 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 141359 | 1 | 860 | 192.21 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF993DGY.bed.gz | 1.52 MB | bdecdc846cdbc613b27a4db4a3eb7d42 |
| ENCFF993DGY.tabix.bed.gz | 1.39 MB | 92a08de57af18d3de527633fc8b1debe |
| ENCFF993DGY.tabix.bed.gz.tbi | 506.57 KB | 74fed85a8727b60269e524f3952f25bf |
| genomic_resource.yaml | 1.07 KB | 58e38cb746f345a5d12083055b597c24 |
| statistics/ |
