Resource

Id DNase-seq/ENCSR503RWOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR503RWO [biosample_summary="Homo sapiens placenta tissue male embryo"]
Description
Labels
  • accession: ENCSR503RWO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue male embryo
  • date_created: 2019-08-02T16:57:25.898429+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR503RWO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR503RWO float

DNase-seq_ENCSR503RWO

DNase-seq ENCSR503RWO [biosample_summary="Homo sapiens placenta tissue male embryo"]
HISTOGRAM FOR DNase-seq_ENCSR503RWO [0.0374, 42.8]
n
27,357,640
mean
1.97
sd
3.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 273576400.85% 144356
chr1 2638767 1.06% 13907
chr2 2134708 0.88% 11336
chr3 1489038 0.75% 8054
chr4 962678 0.51% 5204
chr5 1234052 0.68% 6550
chr6 1285207 0.75% 6977
chr7 1454695 0.91% 7662
chr8 1137526 0.78% 6051
chr9 1323154 0.96% 6941
chr10 1399918 1.05% 7355
chr11 1642661 1.22% 8437
chr12 1185047 0.89% 6339
chr13 463085 0.40% 2508
chr14 939717 0.88% 4894
chr15 1002461 0.98% 5288
chr16 973988 1.08% 5058
chr17 1493531 1.79% 7714
chr18 458560 0.57% 2484
chr19 1218218 2.08% 6281
chr20 866148 1.34% 4582
chr21 440591 0.94% 2266
chr22 860373 1.69% 4350
chrX 694110 0.44% 3773
chrY 59407 0.10% 345
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 144356 1 1074 189.52 180
global segment-length histogram

Files

Filename Size md5
ENCFF451YHG.bed.gz 1.52 MB 32d392079186a0a56a7b29169f8d3d16
ENCFF451YHG.tabix.bed.gz 1.4 MB ce74d4970a0e010f2df82deae5e2cf65
ENCFF451YHG.tabix.bed.gz.tbi 371.74 KB 46a54f2bb268821d2f9bc438a343ff1d
genomic_resource.yaml 1.16 KB 7de35c6762d0a6d895837ccb8ee66ba0
statistics/