Resource

Id DNase-seq/ENCSR468ZXNcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR468ZXN [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years)"]
Description
Labels
  • accession: ENCSR468ZXN
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years)
  • date_created: 2015-09-16T21:42:09.151733+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR468ZXN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (33 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR468ZXN float

DNase-seq_ENCSR468ZXN
DNase-seq ENCSR468ZXN [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (33 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR468ZXN [0.0172, 73.4]
n
47,464,051
mean
2.08
sd
4.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 474640511.48% 245212
chr1 4412198 1.77% 22772
chr2 3832720 1.58% 19973
chr3 3132542 1.58% 16330
chr4 2331151 1.23% 12135
chr5 2529696 1.39% 13139
chr6 2889893 1.69% 14862
chr7 2472150 1.55% 12830
chr8 2159368 1.49% 11160
chr9 1954905 1.41% 10102
chr10 2284841 1.71% 11808
chr11 2264437 1.68% 11730
chr12 2324565 1.74% 12023
chr13 1328993 1.16% 6820
chr14 1544172 1.44% 7971
chr15 1484463 1.46% 7713
chr16 1464528 1.62% 7526
chr17 2038451 2.45% 10405
chr18 1057297 1.32% 5518
chr19 1690708 2.88% 8432
chr20 1219837 1.89% 6272
chr21 601769 1.29% 3089
chr22 900882 1.77% 4586
chrX 1542931 0.99% 8004
chrY 1554 <0.01% 12
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 245212 1 920 193.56 180
global segment-length histogram

Files

Filename Size md5
ENCFF667AVX.bed.gz 2.66 MB e1d08d29442e8fc5a5609d35b3727268
ENCFF667AVX.tabix.bed.gz 2.43 MB cdff6db6a140504a028fa03f5b2a3dfb
ENCFF667AVX.tabix.bed.gz.tbi 658.47 KB ba12ac39f7803559ca13f01d7300ee0e
genomic_resource.yaml 1.29 KB c3c87259d42449f00ec57b802077583d
statistics/