Resource

Id DNase-seq/ENCSR468AKFcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR468AKF [biosample_summary="Homo sapiens B cell male adult (22 years)"]
Description
Labels
  • accession: ENCSR468AKF
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000236/
  • biosample_summary: Homo sapiens B cell male adult (22 years)
  • date_created: 2019-08-24T00:09:21.959382+00:00
  • date_released: 2020-10-05
  • doi: 10.17989/ENCSR468AKF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (22 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR468AKF float

DNase-seq_ENCSR468AKF
DNase-seq ENCSR468AKF [biosample_summary="Homo sapiens B cell male adult (22 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR468AKF [0.0508, 33.6]
n
14,814,476
mean
2.34
sd
3.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 148144760.46% 83766
chr1 1465966 0.59% 8213
chr2 1238010 0.51% 7098
chr3 790438 0.40% 4541
chr4 453620 0.24% 2567
chr5 663782 0.37% 3746
chr6 775665 0.45% 4281
chr7 666188 0.42% 3776
chr8 626629 0.43% 3611
chr9 632612 0.46% 3611
chr10 861688 0.64% 4979
chr11 830732 0.61% 4676
chr12 685675 0.51% 3856
chr13 270650 0.24% 1551
chr14 516580 0.48% 2923
chr15 531095 0.52% 3059
chr16 601263 0.67% 3382
chr17 829111 1.00% 4641
chr18 280878 0.35% 1631
chr19 709734 1.21% 3793
chr20 477757 0.74% 2748
chr21 179935 0.39% 1039
chr22 421446 0.83% 2380
chrX 291359 0.19% 1585
chrY 13663 0.02% 79
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 83766 2 880 176.86 180
global segment-length histogram

Files

Filename Size md5
ENCFF650BNV.bed.gz 906.79 KB bc6e2f152c3946d01f3d10e294b70c20
ENCFF650BNV.tabix.bed.gz 827.2 KB 51c09e5b7deaa6e50bdcf8b474c2212f
ENCFF650BNV.tabix.bed.gz.tbi 254.12 KB 483f25e873c737d94dda1461f165a85a
genomic_resource.yaml 2.0 KB bc22c65d383f13e3a2b16dc2333de8c1
statistics/