Resource

Id DNase-seq/ENCSR453EVCcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR453EVC [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years)"]
Description
Labels
  • accession: ENCSR453EVC
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years)
  • date_created: 2015-09-16T21:42:09.452391+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR453EVC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (36 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR453EVC float

DNase-seq_ENCSR453EVC
DNase-seq ENCSR453EVC [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive male adult (36 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR453EVC [0.266, 63.1]
n
11,886,317
mean
4.01
sd
4.95

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 118863170.37% 65314
chr1 1122105 0.45% 6158
chr2 908674 0.38% 5025
chr3 775199 0.39% 4279
chr4 558553 0.29% 3096
chr5 604245 0.33% 3375
chr6 716491 0.42% 3938
chr7 605681 0.38% 3340
chr8 524823 0.36% 2924
chr9 486197 0.35% 2685
chr10 557503 0.42% 3118
chr11 585426 0.43% 3225
chr12 623261 0.47% 3400
chr13 316729 0.28% 1744
chr14 388036 0.36% 2128
chr15 369906 0.36% 2043
chr16 384048 0.43% 2082
chr17 539176 0.65% 2920
chr18 240855 0.30% 1357
chr19 536115 0.91% 2780
chr20 313871 0.49% 1713
chr21 143440 0.31% 771
chr22 234822 0.46% 1284
chrX 334750 0.21% 1836
chrY 16411 0.03% 93
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65314 14 720 181.99 180
global segment-length histogram

Files

Filename Size md5
ENCFF734TMQ.bed.gz 700.35 KB 5014ca0e69a47d5f41f721954a2fcfb9
ENCFF734TMQ.tabix.bed.gz 626.94 KB ac58b9832fbb519dd6590b48cdc19691
ENCFF734TMQ.tabix.bed.gz.tbi 341.66 KB 424c6d6358024aa219ef99b2bf25e706
genomic_resource.yaml 1.9 KB 2e3ae79d23a653aee850fdd5722f2f54
statistics/