Resource
| Id | DNase-seq/ENCSR410IYF |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR410IYF [biosample_summary="Homo sapiens T-cell male adult (28 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: male adult (28 years) output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR410IYF | float |
DNase-seq_ENCSR410IYF |
DNase-seq ENCSR410IYF [biosample_summary="Homo sapiens T-cell male adult (28 years)"]
|
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[0.19, 90.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 9569270 | 0.30% | 53707 |
| chr1 | 964103 | 0.39% | 5372 |
| chr2 | 676501 | 0.28% | 3821 |
| chr3 | 529678 | 0.27% | 2974 |
| chr4 | 334922 | 0.18% | 1866 |
| chr5 | 431391 | 0.24% | 2442 |
| chr6 | 565515 | 0.33% | 3151 |
| chr7 | 444832 | 0.28% | 2522 |
| chr8 | 353403 | 0.24% | 2004 |
| chr9 | 380095 | 0.27% | 2170 |
| chr10 | 439942 | 0.33% | 2464 |
| chr11 | 487245 | 0.36% | 2756 |
| chr12 | 487217 | 0.37% | 2733 |
| chr13 | 198219 | 0.17% | 1107 |
| chr14 | 343656 | 0.32% | 1924 |
| chr15 | 311192 | 0.31% | 1773 |
| chr16 | 384586 | 0.43% | 2164 |
| chr17 | 572612 | 0.69% | 3179 |
| chr18 | 162503 | 0.20% | 913 |
| chr19 | 596760 | 1.02% | 3241 |
| chr20 | 273169 | 0.42% | 1562 |
| chr21 | 116454 | 0.25% | 649 |
| chr22 | 227202 | 0.45% | 1287 |
| chrX | 275172 | 0.18% | 1563 |
| chrY | 12901 | 0.02% | 70 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 53707 | 1 | 800 | 178.18 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF776FXT.bed.gz | 598.57 KB | ef4bc199a60ba704577870b3ae316694 |
| ENCFF776FXT.tabix.bed.gz | 544.39 KB | a22a5d0eac52833e794747987af3d506 |
| ENCFF776FXT.tabix.bed.gz.tbi | 251.94 KB | a4dd45ce86f24d28c0f1daf1008aea61 |
| genomic_resource.yaml | 1.18 KB | 51d5704d963a01b2febfc38918d5c56f |
| statistics/ |
