Resource
| Id | DNase-seq/ENCSR405TXU |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR405TXU [biosample_summary="Homo sapiens adipocyte"] |
| Description |
status: archived biological_replicates: Rep 1 summary: output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR405TXU | float |
DNase-seq_ENCSR405TXU |
DNase-seq ENCSR405TXU [biosample_summary="Homo sapiens adipocyte"]
|
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[2, 147] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 27604000 | 0.86% | 188795 |
| chr1 | 2593780 | 1.04% | 17789 |
| chr2 | 2331850 | 0.96% | 15900 |
| chr3 | 1887710 | 0.95% | 12865 |
| chr4 | 1581780 | 0.83% | 10792 |
| chr5 | 1631170 | 0.90% | 11067 |
| chr6 | 1721130 | 1.01% | 11753 |
| chr7 | 1404870 | 0.88% | 9731 |
| chr8 | 1298280 | 0.89% | 8836 |
| chr9 | 1176920 | 0.85% | 8056 |
| chr10 | 1288010 | 0.96% | 8801 |
| chr11 | 1330660 | 0.99% | 9077 |
| chr12 | 1394350 | 1.05% | 9501 |
| chr13 | 776180 | 0.68% | 5260 |
| chr14 | 866130 | 0.81% | 5880 |
| chr15 | 864020 | 0.85% | 5912 |
| chr16 | 786570 | 0.87% | 5470 |
| chr17 | 1085490 | 1.30% | 7554 |
| chr18 | 632310 | 0.79% | 4288 |
| chr19 | 833250 | 1.42% | 5777 |
| chr20 | 648660 | 1.01% | 4421 |
| chr21 | 323950 | 0.69% | 2210 |
| chr22 | 438590 | 0.86% | 3011 |
| chrX | 705220 | 0.45% | 4820 |
| chrY | 3120 | 0.01% | 24 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 188795 | 10 | 390 | 146.21 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF154LUC.bed.gz | 1.64 MB | 77c2e0cd27904e698c7068e38a570b13 |
| ENCFF154LUC.tabix.bed.gz | 1.48 MB | ab2a83c1ba80fb39a4932a1d02486c80 |
| ENCFF154LUC.tabix.bed.gz.tbi | 612.69 KB | f40ed33f8abd7ac29969da130d61f50d |
| genomic_resource.yaml | 1.09 KB | 56fc06522d80515d274882bf18b12229 |
| statistics/ |
