Resource

Id DNase-seq/ENCSR371KRYcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR371KRY [biosample_summary="Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)"]
Description
Labels
  • accession: ENCSR371KRY
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000522/
  • biosample_summary: Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)
  • date_created: 2015-09-16T21:42:12.271281+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR371KRY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (97 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR371KRY float

DNase-seq_ENCSR371KRY
DNase-seq ENCSR371KRY [biosample_summary="Homo sapiens fibroblast of skin of left quadriceps male embryo (97 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR371KRY [0.164, 46.1]
n
19,923,250
mean
3.36
sd
3.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 199232500.62% 105576
chr1 1819426 0.73% 9710
chr2 1688496 0.70% 8919
chr3 1418023 0.72% 7491
chr4 1111546 0.58% 5951
chr5 1213973 0.67% 6422
chr6 1276474 0.75% 6667
chr7 993519 0.62% 5319
chr8 955463 0.66% 5025
chr9 875968 0.63% 4612
chr10 939278 0.70% 4965
chr11 978338 0.72% 5204
chr12 992416 0.74% 5268
chr13 594990 0.52% 3148
chr14 612697 0.57% 3228
chr15 666461 0.65% 3509
chr16 554612 0.61% 2987
chr17 711831 0.85% 3807
chr18 486412 0.61% 2588
chr19 517915 0.88% 2696
chr20 475848 0.74% 2523
chr21 247549 0.53% 1300
chr22 276136 0.54% 1494
chrX 491345 0.31% 2619
chrY 24534 0.04% 124
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105576 1 900 188.71 180
global segment-length histogram

Files

Filename Size md5
ENCFF353GBN.bed.gz 1.11 MB 68f369aad8b16a17e7284cac50fab030
ENCFF353GBN.tabix.bed.gz 1021.09 KB c1e5f0e4a775951f70b82a146fb06b58
ENCFF353GBN.tabix.bed.gz.tbi 491.03 KB 346ab9ddbf13ddb98eb5159b707be4d9
genomic_resource.yaml 1.89 KB b4f36a0a696b5d9b1ad88c4415c91746
statistics/