Resource

Id DNase-seq/ENCSR367FKPcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR367FKP [biosample_summary="Homo sapiens suppressor macrophage male adult (24 years)"]
Description
Labels
  • accession: ENCSR367FKP
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000862/
  • biosample_summary: Homo sapiens suppressor macrophage male adult (24 years)
  • date_created: 2021-11-18T17:43:08.196167+00:00
  • date_released: 2022-06-07
  • doi: 10.17989/ENCSR367FKP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (24 years)
  • status: released
  • submitter_comment: This dataset includes replicates and files that were previously associated with dataset ENCSR711AQM.

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR367FKP float

DNase-seq_ENCSR367FKP
DNase-seq ENCSR367FKP [biosample_summary="Homo sapiens suppressor macrophage male adult (24 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR367FKP [0.0492, 32.5]
n
42,904,860
mean
2.19
sd
3.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 429048601.33% 236999
chr1 4113792 1.65% 22751
chr2 3482169 1.44% 19288
chr3 2851107 1.44% 15825
chr4 1921884 1.01% 10822
chr5 2323937 1.28% 12883
chr6 2596125 1.52% 14266
chr7 2091015 1.31% 11623
chr8 1976181 1.36% 10942
chr9 1799708 1.30% 9947
chr10 2120892 1.59% 11692
chr11 2115780 1.57% 11575
chr12 2164567 1.62% 11931
chr13 1050030 0.92% 5873
chr14 1364579 1.27% 7485
chr15 1434089 1.41% 7938
chr16 1379311 1.53% 7589
chr17 1944813 2.34% 10593
chr18 909428 1.13% 5065
chr19 1495455 2.55% 8007
chr20 1183715 1.84% 6543
chr21 511158 1.09% 2805
chr22 785835 1.55% 4319
chrX 1237071 0.79% 6935
chrY 52219 0.09% 302
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 236999 2 940 181.03 180
global segment-length histogram

Files

Filename Size md5
ENCFF109JOE.bed.gz 2.56 MB 9efae59cbbc50696eb3138af12a8e31d
ENCFF109JOE.tabix.bed.gz 2.33 MB c88717f6a07e4468e66804de26f434dc
ENCFF109JOE.tabix.bed.gz.tbi 637.59 KB 7eaa68bc4964e27eb09690a8d8f27709
genomic_resource.yaml 1.32 KB efaf385d544bfd821a2ed96a1ab8225b
statistics/