Resource

Id DNase-seq/ENCSR363BTBcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR363BTB [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)"]
Description
Labels
  • accession: ENCSR363BTB
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000625/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)
  • date_created: 2019-08-24T00:09:41.003022+00:00
  • date_released: 2020-10-06
  • doi: 10.17989/ENCSR363BTB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR363BTB float

DNase-seq_ENCSR363BTB
DNase-seq ENCSR363BTB [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR363BTB [0.0371, 143]
n
13,582,581
mean
6.28
sd
12

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 135825810.42% 77259
chr1 1332151 0.54% 7505
chr2 898098 0.37% 5119
chr3 670004 0.34% 3887
chr4 495727 0.26% 2877
chr5 569958 0.31% 3247
chr6 694999 0.41% 3913
chr7 644882 0.40% 3677
chr8 533631 0.37% 3115
chr9 612010 0.44% 3565
chr10 540763 0.40% 3072
chr11 752799 0.56% 4294
chr12 636800 0.48% 3600
chr13 273705 0.24% 1579
chr14 458894 0.43% 2608
chr15 388995 0.38% 2237
chr16 668087 0.74% 3774
chr17 900483 1.08% 5058
chr18 189847 0.24% 1099
chr19 874014 1.49% 4779
chr20 420879 0.65% 2364
chr21 199135 0.43% 1133
chr22 439975 0.87% 2505
chrX 371116 0.24% 2154
chrY 15629 0.03% 98
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77259 4 700 175.81 179
global segment-length histogram

Files

Filename Size md5
ENCFF139HDN.bed.gz 868.02 KB d104fae099c90e12548dd61c6dbce838
ENCFF139HDN.tabix.bed.gz 790.78 KB c4fab3722e7f470762e68a4c3b4a5923
ENCFF139HDN.tabix.bed.gz.tbi 267.64 KB 47071010b5a2507d3af771c559ddc3af
genomic_resource.yaml 1.26 KB 4ae5bab49306b3b77c53036aca59824f
statistics/