Resource

Id DNase-seq/ENCSR361DNDcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR361DND [biosample_summary="Homo sapiens lower leg skin tissue male adult (37 years)"]
Description
Labels
  • accession: ENCSR361DND
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004264/
  • biosample_summary: Homo sapiens lower leg skin tissue male adult (37 years)
  • date_created: 2019-07-29T20:41:32.929955+00:00
  • date_released: 2019-11-08
  • doi: 10.17989/ENCSR361DND
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR361DND float

DNase-seq_ENCSR361DND

DNase-seq ENCSR361DND [biosample_summary="Homo sapiens lower leg skin tissue male adult (37 years)"]
HISTOGRAM FOR DNase-seq_ENCSR361DND [5, 7.31e+03]
n
10,927,584
mean
90.7
sd
91.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 109275840.34% 72686
chr1 1049913 0.42% 6984
chr2 858917 0.35% 5714
chr3 692194 0.35% 4607
chr4 476904 0.25% 3170
chr5 581745 0.32% 3874
chr6 648213 0.38% 4309
chr7 530260 0.33% 3525
chr8 485365 0.33% 3231
chr9 473227 0.34% 3149
chr10 548710 0.41% 3654
chr11 551225 0.41% 3664
chr12 547444 0.41% 3644
chr13 260101 0.23% 1731
chr14 354844 0.33% 2353
chr15 378378 0.37% 2518
chr16 383156 0.42% 2551
chr17 500900 0.60% 3327
chr18 216315 0.27% 1437
chr19 452327 0.77% 3007
chr20 297647 0.46% 1982
chr21 131829 0.28% 877
chr22 209205 0.41% 1393
chrX 283315 0.18% 1882
chrY 15450 0.03% 103
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 72686 1 450 150.34 150
global segment-length histogram

Files

Filename Size md5
ENCFF364OTY.bed.gz 724.79 KB 72f23dc32df638938e4686ccecef76b4
ENCFF364OTY.tabix.bed.gz 617.04 KB 44a2add2741516b7c6edd19c519f2b4e
ENCFF364OTY.tabix.bed.gz.tbi 345.36 KB 2f2ee43e065d661a999cc4ca44501f35
genomic_resource.yaml 2.2 KB 0929f7274dcca16a9433fe9c3a66b71a
statistics/