Resource

Id DNase-seq/ENCSR357AWHcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR357AWH [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)"]
Description
Labels
  • accession: ENCSR357AWH
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002170/
  • biosample_summary: Homo sapiens upper lobe of right lung tissue male adult (60 years)
  • date_created: 2019-04-10T20:30:58.456934+00:00
  • date_released: 2020-10-02
  • doi: 10.17989/ENCSR357AWH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR357AWH float

DNase-seq_ENCSR357AWH
DNase-seq ENCSR357AWH [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR357AWH [0.0332, 34.2]
n
36,644,391
mean
1.14
sd
2.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 366443911.14% 171904
chr1 3480047 1.40% 16175
chr2 2956831 1.22% 13701
chr3 1677115 0.85% 7948
chr4 1170241 0.62% 5535
chr5 1552223 0.86% 7383
chr6 1289304 0.75% 6273
chr7 2121144 1.33% 9855
chr8 1483081 1.02% 6977
chr9 1896293 1.37% 8737
chr10 1956977 1.46% 9109
chr11 2399845 1.78% 10860
chr12 1412762 1.06% 6771
chr13 590104 0.52% 2819
chr14 1189748 1.11% 5561
chr15 1257526 1.23% 5979
chr16 1677092 1.86% 8101
chr17 2427233 2.92% 11391
chr18 550504 0.68% 2667
chr19 1577917 2.69% 7579
chr20 1132424 1.76% 5392
chr21 717403 1.54% 3269
chr22 1540882 3.03% 6953
chrX 571669 0.37% 2774
chrY 16026 0.03% 95
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 171904 1 1260 213.17 200
global segment-length histogram

Files

Filename Size md5
ENCFF226HAT.bed.gz 1.69 MB f05f9a238fc76950aec12ea434105d92
ENCFF226HAT.tabix.bed.gz 1.6 MB 385fa3b2a69c06a714f2c6a4648808c1
ENCFF226HAT.tabix.bed.gz.tbi 304.01 KB 471a0fedb6a398e873e5b1ed6dfab5a7
genomic_resource.yaml 1.26 KB d003e53a498f2a71c15b2aa5f939ff5c
statistics/