Resource

Id DNase-seq/ENCSR355WAJcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR355WAJ [biosample_summary="Homo sapiens left ventricle myocardium superior tissue male adult (60 years)"]
Description
Labels
  • accession: ENCSR355WAJ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0000494/
  • biosample_summary: Homo sapiens left ventricle myocardium superior tissue male adult (60 years)
  • date_created: 2019-02-01T19:03:39.737499+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR355WAJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR355WAJ float

DNase-seq_ENCSR355WAJ
DNase-seq ENCSR355WAJ [biosample_summary="Homo sapiens left ventricle myocardium superior tissue male adult (60 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR355WAJ [0.0345, 76.9]
n
25,769,052
mean
2.8
sd
5.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 257690520.80% 140610
chr1 2333061 0.94% 12705
chr2 1810966 0.75% 10090
chr3 1282767 0.65% 7149
chr4 983970 0.52% 5386
chr5 1101669 0.61% 6163
chr6 1064055 0.62% 5981
chr7 1327999 0.83% 7293
chr8 1126022 0.78% 6148
chr9 1315106 0.95% 7048
chr10 1269241 0.95% 6934
chr11 1627421 1.20% 8734
chr12 1086061 0.81% 5920
chr13 487800 0.43% 2718
chr14 808477 0.76% 4379
chr15 773056 0.76% 4307
chr16 1177142 1.30% 6318
chr17 1592222 1.91% 8572
chr18 414441 0.52% 2326
chr19 1329720 2.27% 7031
chr20 930615 1.44% 4965
chr21 431238 0.92% 2342
chr22 953215 1.88% 5088
chrX 524663 0.34% 2897
chrY 18125 0.03% 116
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 140610 1 980 183.27 180
global segment-length histogram

Files

Filename Size md5
ENCFF124JWA.bed.gz 1.5 MB 99f5e1c740490aace09cdeeb59bdee0f
ENCFF124JWA.tabix.bed.gz 1.38 MB 21bcb2b5ef9d597ebf5611921b05c072
ENCFF124JWA.tabix.bed.gz.tbi 390.24 KB 0a1dcb02974d59512e7cddb7d74bfeed
genomic_resource.yaml 1.28 KB 870083bc5a4f034cbe6738d6fbebd66c
statistics/