Resource

Id DNase-seq/ENCSR351FWNcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR351FWN [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (88 years)"]
Description
Labels
  • accession: ENCSR351FWN
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (88 years)
  • date_created: 2020-05-28T00:56:21.802981+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR351FWN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (88 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR351FWN float

DNase-seq_ENCSR351FWN
DNase-seq ENCSR351FWN [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (88 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR351FWN [0.0599, 33.5]
n
16,406,489
mean
2.02
sd
2.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 164064890.51% 88865
chr1 1499233 0.60% 8168
chr2 1286867 0.53% 7017
chr3 854030 0.43% 4678
chr4 679666 0.36% 3597
chr5 762519 0.42% 4241
chr6 708745 0.41% 3943
chr7 834698 0.52% 4546
chr8 739403 0.51% 3976
chr9 697774 0.50% 3791
chr10 874340 0.65% 4661
chr11 1006933 0.75% 5379
chr12 731960 0.55% 4029
chr13 296210 0.26% 1642
chr14 550765 0.51% 2988
chr15 513826 0.50% 2846
chr16 693807 0.77% 3704
chr17 922668 1.11% 4960
chr18 293800 0.37% 1605
chr19 783911 1.34% 4093
chr20 505468 0.78% 2775
chr21 258217 0.55% 1355
chr22 581750 1.14% 3079
chrX 329200 0.21% 1786
chrY 699 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88865 2 1180 184.62 180
global segment-length histogram

Files

Filename Size md5
ENCFF351AFQ.bed.gz 960.12 KB 7384bf84c746774c89beaf9b75b44716
ENCFF351AFQ.tabix.bed.gz 872.22 KB 936945ea50e4c3274fc8bc46118b39b0
ENCFF351AFQ.tabix.bed.gz.tbi 309.95 KB 7633e96a76cd42d700fd9f76a1113de9
genomic_resource.yaml 1.28 KB aaa0e33cf7d6ed64d82687ab2473304e
statistics/