Resource
| Id | DNase-seq/ENCSR336RGT |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR336RGT [biosample_summary="Homo sapiens placenta tissue male embryo"] |
| Description |
status: released biological_replicates: Rep 1 summary: male embryo output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR336RGT | float |
DNase-seq_ENCSR336RGT |
DNase-seq ENCSR336RGT [biosample_summary="Homo sapiens placenta tissue male embryo"]
|
![]() |
[0.0262, 38.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 37915774 | 1.18% | 203534 |
| chr1 | 3671539 | 1.47% | 19655 |
| chr2 | 2978820 | 1.23% | 16066 |
| chr3 | 2102429 | 1.06% | 11375 |
| chr4 | 1202529 | 0.63% | 6642 |
| chr5 | 1705246 | 0.94% | 9282 |
| chr6 | 1677784 | 0.98% | 9285 |
| chr7 | 2236527 | 1.40% | 11846 |
| chr8 | 1532248 | 1.06% | 8211 |
| chr9 | 1783032 | 1.29% | 9509 |
| chr10 | 2000288 | 1.50% | 10628 |
| chr11 | 2371553 | 1.76% | 12436 |
| chr12 | 1493657 | 1.12% | 8242 |
| chr13 | 592534 | 0.52% | 3266 |
| chr14 | 1366630 | 1.28% | 7257 |
| chr15 | 1375351 | 1.35% | 7412 |
| chr16 | 1603273 | 1.77% | 8575 |
| chr17 | 2042535 | 2.45% | 10918 |
| chr18 | 574017 | 0.71% | 3138 |
| chr19 | 1504478 | 2.57% | 7973 |
| chr20 | 1276819 | 1.98% | 6845 |
| chr21 | 705570 | 1.51% | 3680 |
| chr22 | 1395602 | 2.75% | 7203 |
| chrX | 683373 | 0.44% | 3841 |
| chrY | 39940 | 0.07% | 249 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 203534 | 1 | 1080 | 186.29 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF987IMB.bed.gz | 2.07 MB | 6cfe9017a8282697250f6db99497e113 |
| ENCFF987IMB.tabix.bed.gz | 1.92 MB | 533efc52abd6712941fb2539d1e0a516 |
| ENCFF987IMB.tabix.bed.gz.tbi | 396.34 KB | 05788d1a74fe4a3fc091a78a43358b48 |
| genomic_resource.yaml | 1.16 KB | 8181bed97ba10379e1956af59ea0af0c |
| statistics/ |
