Resource

Id DNase-seq/ENCSR330ZBOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR330ZBO [biosample_summary="Homo sapiens ovary tissue female adult (59 years)"]
Description
Labels
  • accession: ENCSR330ZBO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000992/
  • biosample_summary: Homo sapiens ovary tissue female adult (59 years)
  • date_created: 2019-11-01T20:44:45.038007+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR330ZBO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR330ZBO float

DNase-seq_ENCSR330ZBO

DNase-seq ENCSR330ZBO [biosample_summary="Homo sapiens ovary tissue female adult (59 years)"]
HISTOGRAM FOR DNase-seq_ENCSR330ZBO [0.0341, 40.2]
n
16,587,251
mean
2.86
sd
3.83

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 165872510.52% 83113
chr1 1589413 0.64% 7947
chr2 1261140 0.52% 6365
chr3 915621 0.46% 4650
chr4 592396 0.31% 2994
chr5 739104 0.41% 3768
chr6 841982 0.49% 4244
chr7 755458 0.47% 3847
chr8 668292 0.46% 3397
chr9 812844 0.59% 4030
chr10 816996 0.61% 4163
chr11 943394 0.70% 4629
chr12 776262 0.58% 3887
chr13 297662 0.26% 1513
chr14 587787 0.55% 2914
chr15 544636 0.53% 2783
chr16 661765 0.73% 3303
chr17 939795 1.13% 4599
chr18 325460 0.40% 1648
chr19 873437 1.49% 4170
chr20 482125 0.75% 2465
chr21 255794 0.55% 1233
chr22 454911 0.90% 2257
chrX 450292 0.29% 2301
chrY 685 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 83113 1 920 199.57 186
global segment-length histogram

Files

Filename Size md5
ENCFF199AYL.bed.gz 914.57 KB 5cbd0e2b282fead092502a9fb69d43fe
ENCFF199AYL.tabix.bed.gz 844.56 KB ecfbcd2f95d9d93ee69812f48bb13972
ENCFF199AYL.tabix.bed.gz.tbi 295.29 KB 5610a470baa44a930fbc4ac07c896bb5
genomic_resource.yaml 1.21 KB 9e6570b09db478c7c9686a5a5bd1c359
statistics/